RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 SLITRK3O94933 977 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ABCB1P08183 1280 aaPredicted RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SLC1A6P48664 564 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 YWHAZP63104 245 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ACAP1Q15027 740 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TAB1Q15750 504 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 GRIK5Q16478 980 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PRMT9Q6P2P2 845 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 OTOP1Q7RTM1 612 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CHST13Q8NET6 341 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 HPDLQ96IR7 371 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SMAD5Q99717 465 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PHACTR1Q9C0D0 580 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SLCO1B3Q9NPD5 702 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 LNPEPQ9UIQ6 1025 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 VAV3Q9UKW4 847 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TULP2O00295 520 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 AHCYL1O43865 530 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ZBTB7AO95365 584 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 HSMCR30P0CW71 290 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 YY1P25490 414 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 YWHAQP27348 245 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 GTF2E2P29084 291 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SLC12A3P55017 1021 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CDC16Q13042 620 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 NRF1Q16656 503 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SLC45A4Q5BKX6 768 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ATF7IP2Q5U623 682 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CHSY1Q86X52 802 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SNX32Q86XE0 403 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MSL3Q8N5Y2 521 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 KAT2BQ92831 832 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 APBB2Q92870 758 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MKL1Q969V6 931 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 DEFB129Q9H1M3 183 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SEMA6AQ9H2E6 1030 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MYRFQ9Y2G1 1151 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ACOT9Q9Y305 439 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PRR23AA6NEV1 266 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SNPHO15079 494 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 LGR5O75473 907 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PIAS1O75925 651 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 BAIAP3O94812 1187 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CNPP09543 421 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZSCAN5DPP0CG00 497 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 RPS12P25398 132 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 HNRNPH3P31942 346 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 POLD3Q15054 466 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 QPCTQ16769 361 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 GSTA3Q16772 222 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZRANB3Q5FWF4 1079 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 RSBN1Q5VWQ0 802 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 MFSD7Q6UXD7 560 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 TSHZ1Q6ZSZ6 1077 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 C4orf32Q8N8J7 132 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 HAS1Q92839 578 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 DNAJC19Q96DA6 116 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 OMA1Q96E52 524 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PTPRHQ9HD43 1115 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 GALNT8Q9NY28 637 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 GGA2Q9UJY4 613 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 DNPEPQ9ULA0 475 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 EME2A4GXA9 379 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 INPP4BO15327 924 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ITGB3P05106 788 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 FASP25445 335 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 STAT5AP42229 794 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SLC11A2P49281 568 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 TRAF2Q12933 501 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CYP51A1Q16850 503 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CLEC16AQ2KHT3 1053 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 FOXR2Q6PJQ5 311 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 RIPOR1Q6ZS17 1223 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PEG10Q86TG7 708 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 APOPT1Q96IL0 206 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 MTMR12Q9C0I1 747 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SLITRK2Q9H156 845 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PRMT7Q9NVM4 692 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 THAP1Q9NVV9 213 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 GPRC5DQ9NZD1 345 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 AHSPQ9NZD4 102 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CCDC189A1A4V9 331 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 NCF1BA6NI72 391 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 NCF1CA8MVU1 366 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 FAM220BPB1ANY3 271 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 UBDO15205 165 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZW10O43264 779 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PDE9AO76083 593 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SERPINE1P05121 402 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 RPLP2P05387 115 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 NCF1P14598 390 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZNF24P17028 368 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ATP6V1C1P21283 382 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms