RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TRAPPC3O43617 180 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ARPP19P56211 112 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF844Q08AG5 666 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 MTAPQ13126 283 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 TERB2Q8NHR7 220 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 NXPE2Q96DL1 559 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 MAGEB18Q96M61 343 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 INSRP06213 1382 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 FCER2P06734 321 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ADD1P35611 737 aaKnown RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 YAP1P46937 504 aaKnown RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 RFX3P48380 749 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 MSLNQ13421 630 aaPredicted RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 STRIP1Q5VSL9 837 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF554Q86TJ5 538 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM13CQ8NE31 585 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 P2RX5Q93086 422 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 CEP295NLQ96MC4 621 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 PIGSQ96S52 555 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 AMNQ9BXJ7 453 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ROPN1BQ9BZX4 212 aaPredicted RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ROPN1Q9HAT0 212 aaPredicted RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ABCB6Q9NP58 842 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 GHRLQ9UBU3 117 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 GDAQ9Y2T3 454 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 SEMA3EO15041 775 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 DHX40Q8IX18 779 aaKnown RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 PGBD3Q8N328 593 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 EIF4E1BA6NMX2 242 aaKnown RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 HK1P19367 917 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 NAMPTP43490 491 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 PHKA2P46019 1235 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF550Q7Z398 422 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 OR7D4Q8NG98 312 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 MAGEB10Q96LZ2 347 aaPredicted RBP8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 TRPV5Q9NQA5 729 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 PCDHGA11Q9Y5H2 935 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 SYCP2Q9BX26 1530 aa8.77□□□□□ -1.01
CACNA1C-220ENST00000399655 WEE1P30291 646 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 DNAJA1P31689 397 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 RPL4P36578 427 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 DYRK1AQ13627 763 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF283Q8N7M2 679 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MGME1Q9BQP7 344 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 OR6C6A6NF89 314 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 RNASEH1O60930 286 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PDYNP01213 254 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 GSSP48637 474 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 FIGNL1Q6PIW4 674 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 COMTD1Q86VU5 262 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SEC14L1Q92503 715 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 TEKT5Q96M29 485 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 EIF2AK4Q9P2K8 1649 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MYH1P12882 1939 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MYH4Q9Y623 1939 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SPTLC1O15269 473 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 STK17BO94768 372 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MBD4O95243 580 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PEPDP12955 493 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MZF1P28698 734 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC7A5Q01650 507 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SEL1L3Q68CR1 1132 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 C9orf72Q96LT7 481 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 GPER1Q99527 375 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 OR1I1O60431 355 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ITGB6P18564 788 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 NMT1P30419 496 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 RPL3P39023 403 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 NAIF1Q69YI7 327 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 C8orf59Q8N0T1 100 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SPATA22Q8NHS9 363 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 BORCS5Q969J3 196 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC12A5Q9H2X9 1139 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 NOD2Q9HC29 1040 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF180Q9UJW8 692 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PARD3Q8TEW0 1356 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PDE2AO00408 941 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 KDM4BO94953 1096 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 NT5C2P49902 561 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 LENG1Q96BZ8 264 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 TUBG2Q9NRH3 451 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 E7ESA3 106 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 IFNGP01579 166 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 FBXO11Q86XK2 927 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 OR6B3Q8NGW1 331 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 TCTEX1D2Q8WW35 142 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 GANQ9H2C0 597 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 KIAA1024Q9UPX6 916 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM240BA0A1B0GVZ2 78 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 C2orf81A6NN90 581 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 CNTFP26441 200 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 AP3M2P53677 418 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PON3Q15166 354 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 USP41Q3LFD5 358 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 FIP1L1Q6UN15 594 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC30A5Q8TAD4 765 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 STRBPQ96SI9 672 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms