RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 WFIKKN2Q8TEU8 576 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 CYB5D2Q8WUJ1 264 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 KCTD13Q8WZ19 329 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 SMARCE1Q969G3 411 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 TMA16Q96EY4 203 aaKnown RBP11.6□□□□□ -0.55
SRMP1-201ENST00000398959 GSDMAQ96QA5 445 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 CNGB3Q9NQW8 809 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 ABCB8Q9NUT2 735 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 EIF2B4Q9UI10 523 aaKnown RBP11.6□□□□□ -0.55
SRMP1-201ENST00000398959 KIAA1257Q9ULG3 409 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 KNL1Q8NG31 2342 aa11.6□□□□□ -0.55
SRMP1-201ENST00000398959 MYLKQ15746 1914 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 SRRM3A6NNA2 597 aaPredicted RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 METTL12A8MUP2 240 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 O00370 1275 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 PIK3R2O00459 728 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 IGLV3-19P01714 112 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 FTH1P19P0C7X4 201 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 MATKP42679 507 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 RGS7P49802 495 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 PMS1P54277 932 aaKnown RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 DAOAP59103 153 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 CAMK2GQ13555 558 aaPredicted RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 STIM1Q13586 685 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 TMEM270Q6UE05 265 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 IL27RAQ6UWB1 636 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 ZC3H3Q8IXZ2 948 aaKnown RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 AHI1Q8N157 1196 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 ZNF366Q8N895 744 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 SETD7Q8WTS6 366 aaKnown RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 ERCC4Q92889 916 aaPredicted RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 GTPBP4Q9BZE4 634 aaKnown RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 LHX5Q9H2C1 402 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 GAREM1Q9H706 876 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 HOOK1Q9UJC3 728 aaKnown RBP11.59□□□□□ -0.55
SRMP1-201ENST00000398959 GGA2Q9UJY4 613 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 STOML2Q9UJZ1 356 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 PCDHB4Q9Y5E5 795 aa11.59□□□□□ -0.55
SRMP1-201ENST00000398959 M0QYV0 167 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PSMA7O14818 248 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 TBL1XO60907 577 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 ATP5BP06576 529 aaKnown RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PAEPP09466 180 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PABPC1P11940 636 aaKnown RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 POLR2EP19388 210 aaKnown RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 SLC11A2P49281 568 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 FMO5P49326 533 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 SGSHP51688 502 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 CETN1Q12798 172 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 CCDC40Q4G0X9 1142 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 NUGGCQ68CJ6 796 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 MBLAC2Q68D91 279 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PMF1Q6P1K2 205 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 RFWD3Q6PCD5 774 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 LCLAT1Q6UWP7 414 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 UNC45BQ8IWX7 931 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 SCML4Q8N228 414 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PPM1KQ8N3J5 372 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 UBR7Q8N806 425 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PNPLA1Q8N8W4 532 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 NT5C1BQ96P26 610 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 PCED1AQ9H1Q7 454 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 TMEM245Q9H330 911 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 C6orf106Q9H6K1 298 aaPredicted RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 FBRSQ9HAH7 460 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 IL21RQ9HBE5 538 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 METTL14Q9HCE5 456 aaKnown RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 TM7SF3Q9NS93 570 aa11.58□□□□□ -0.56
SRMP1-201ENST00000398959 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 GOLGA4Q13439 2230 aaKnown RBP11.58□□□□□ -0.56
SRMP1-201ENST00000398959 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 FAM221BA6H8Z2 402 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 IRAK2O43187 625 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 LTFP02788 710 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 DNTTP04053 509 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 DLDP09622 509 aaKnown RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 ZNF883P0CG24 379 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 BRD2P25440 801 aaKnown RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 ACSL1P33121 698 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 CSNK1EP49674 416 aaKnown RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 AFF3P51826 1226 aaKnown RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 TBX4P57082 545 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 STILQ15468 1287 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 TEAD4Q15561 434 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 PTPRNQ16849 979 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 HLA-BQ31612 363 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 TTC31Q49AM3 519 aaPredicted RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 PKDCCQ504Y2 493 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 ISM2Q6H9L7 571 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 MSANTD2Q6P1R3 559 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 KIAA0907Q7Z7F0 614 aaPredicted RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 ADIPOR2Q86V24 386 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 MFN1Q8IWA4 741 aa11.57□□□□□ -0.56
SRMP1-201ENST00000398959 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 ZNF557Q8N988 423 aaPredicted RBP11.57□□□□□ -0.56
SRMP1-201ENST00000398959 WFDC5Q8TCV5 224 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms