RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 WASH3PC4AMC7 463 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 E5RJQ4 531 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 CAPN9O14815 690 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 TIMM44O43615 452 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 CEACAM1P13688 526 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 PRKCSHP14314 528 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 NDUFV2P19404 249 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 CSRP1P21291 193 aaKnown RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 APBA1Q02410 837 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 ARID5AQ03989 594 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 PTK2Q05397 1052 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 NNTQ13423 1086 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 DAB2IPQ5VWQ8 1189 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 SLC36A4Q6YBV0 504 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 BEND5Q7L4P6 421 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 TMEFF1Q8IYR6 380 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 FRMD1Q8N878 549 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 DQX1Q8TE96 717 aaKnown RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 SHC3Q92529 594 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 AZIN2Q96A70 460 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 ERLEC1Q96DZ1 483 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 SLC4A5Q9BY07 1137 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 IRX2Q9BZI1 471 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 CIPCQ9C0C6 399 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 NDST4Q9H3R1 872 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 CD248Q9HCU0 757 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 ACP6Q9NPH0 428 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 ELOVL2Q9NXB9 296 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 MBD1Q9UIS9 605 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-202ENST00000398729 NAALADL1Q9UQQ1 740 aa13.95□□□□□ -0.18
VCX3A-202ENST00000398729 IGSF10Q6WRI0 2623 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 PI4KAP42356 2102 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 KHNYNO15037 678 aaKnown RBP13.94□□□□□ -0.18
VCX3A-202ENST00000398729 IRAK2O43187 625 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 PAPSS1O43252 624 aaPredicted RBP13.94□□□□□ -0.18
VCX3A-202ENST00000398729 AP5Z1O43299 807 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 ACSL4O60488 711 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 SYNCRIPO60506 623 aaKnown RBP13.94□□□□□ -0.18
VCX3A-202ENST00000398729 FYNP06241 537 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 DPP6P42658 865 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 IL12RB1P42701 662 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 RPL6Q02878 288 aaKnown RBP13.94□□□□□ -0.18
VCX3A-202ENST00000398729 PDCLQ13371 301 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 ENPP2Q13822 863 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 CT47A1Q5JQC4 288 aaPredicted RBP13.94□□□□□ -0.18
VCX3A-202ENST00000398729 MPP7Q5T2T1 576 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 ARMCX6Q7L4S7 300 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 WFIKKN2Q8TEU8 576 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 PIGKQ92643 395 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 MRGPRX1Q96LB2 322 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 ADAM33Q9BZ11 813 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 TMEM9BQ9NQ34 198 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 LMBRD1Q9NUN5 540 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 DNAJC12Q9UKB3 198 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 TLR6Q9Y2C9 796 aa13.94□□□□□ -0.18
VCX3A-202ENST00000398729 SETXQ7Z333 2677 aaKnown RBP13.94□□□□□ -0.18
VCX3A-202ENST00000398729 CELSR3Q9NYQ7 3312 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 GCN1Q92616 2671 aaKnown RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 TYW5A2RUC4 315 aaKnown RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 PES1O00541 588 aaKnown RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 TBL1XO60907 577 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 HLA-FP30511 346 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 PTGER3P43115 390 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 YWHAZP63104 245 aaKnown RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 ZNF234Q14588 700 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 FUT11Q495W5 492 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 HSP90AA4PQ58FG1 418 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 LYSMD4Q5XG99 296 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 RFWD3Q6PCD5 774 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 LRSAM1Q6UWE0 723 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 KIAA1324Q6UXG2 1013 aaKnown RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 SERPINA13PQ6UXR4 307 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 CHST9Q7L1S5 443 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 SYT12Q8IV01 421 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 AHI1Q8N157 1196 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 ZNF557Q8N988 423 aaPredicted RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 SORCS1Q8WY21 1168 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 FCRL2Q96LA5 508 aaPredicted RBP13.93□□□□□ -0.18
VCX3A-202ENST00000398729 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 GBP4Q96PP9 640 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 POPDC2Q9HBU9 364 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 SIX2Q9NPC8 291 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 ABCB8Q9NUT2 735 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 CYTH4Q9UIA0 394 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 PCDHGC3Q9UN70 934 aa13.93□□□□□ -0.18
VCX3A-202ENST00000398729 CEP192Q8TEP8 1941 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 IGHV1OR15-9A0A0B4J2B8 117 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 GOLGA6L7A0A1B0GV03 622 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 APOEP02649 317 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 PABPC1P11940 636 aaKnown RBP13.92□□□□□ -0.18
VCX3A-202ENST00000398729 SLC6A4P31645 630 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms