RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 FAM72AQ5TYM5 149 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 PIK3R6Q5UE93 754 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 FAM72DQ6L9T8 149 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 FAM72BQ86X60 149 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 TSC1Q92574 1164 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 WBP2Q969T9 261 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 NAP1L3Q99457 506 aaPredicted RBP16.9■□□□□ 0.3
SMAGP-202ENST00000398453 EPAS1Q99814 870 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 CARD6Q9BX69 1037 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 CWC15Q9P013 229 aaKnown RBP16.9■□□□□ 0.3
SMAGP-202ENST00000398453 NUP210Q8TEM1 1887 aaPredicted RBP16.9■□□□□ 0.3
SMAGP-202ENST00000398453 CLUHO75153 1309 aa16.9■□□□□ 0.3
SMAGP-202ENST00000398453 TCRBV7S2A1N4TA0A589 114 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 TPI1P60174 286 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 DYNLT1P63172 113 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 CLUL1Q15846 466 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 CTC1Q2NKJ3 1217 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 ANKRD20A8PQ5CZ79 823 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 MS4A13Q5J8X5 152 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 RAP1GAP2Q684P5 730 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 Q7L0L9 218 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 GET4Q7L5D6 327 aaPredicted RBP16.89■□□□□ 0.29
SMAGP-202ENST00000398453 CHSY1Q86X52 802 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 VSIG1Q86XK7 387 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 DENND1CQ8IV53 801 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 CMTM8Q8IZV2 173 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.89■□□□□ 0.29
SMAGP-202ENST00000398453 ADAMTS19Q8TE59 1207 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 FAF2Q96CS3 445 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 AP1M1Q9BXS5 423 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 MAK16Q9BXY0 300 aaKnown RBP16.89■□□□□ 0.29
SMAGP-202ENST00000398453 ADAM7Q9H2U9 754 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 CFAP97Q9P2B7 532 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 RCOR3Q9P2K3 495 aaPredicted RBP16.89■□□□□ 0.29
SMAGP-202ENST00000398453 OR12D3Q9UGF7 316 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 ARHGAP26Q9UNA1 814 aa16.89■□□□□ 0.29
SMAGP-202ENST00000398453 SOBPA7XYQ1 873 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ZNF487B1APH4 448 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 LEFTY2O00292 366 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 KRIT1O00522 736 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 SCAMP3O14828 347 aaKnown RBP16.88■□□□□ 0.29
SMAGP-202ENST00000398453 DAPK3O43293 454 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ACSL4O60488 711 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 CST8O60676 142 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 LRIG2O94898 1065 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 IL4RP24394 825 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 SLC11A2P49281 568 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ZXDBP98169 803 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ITIH3Q06033 890 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ADCY2Q08462 1091 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 MTA1Q13330 715 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 NADSYN1Q6IA69 706 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 CES5AQ6NT32 575 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 RFX8Q6ZV50 586 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 C14orf80Q86SX3 495 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 CEP112Q8N8E3 955 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 MNS1Q8NEH6 495 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 PCDH19Q8TAB3 1148 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 TBC1D31Q96DN5 1066 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ZSWIM3Q96MP5 696 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 RNF157Q96PX1 679 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 ZMYM5Q9UJ78 669 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 LSM7Q9UK45 103 aaKnown RBP16.88■□□□□ 0.29
SMAGP-202ENST00000398453 SH3BP1Q9Y3L3 701 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
SMAGP-202ENST00000398453 DENND4AQ7Z401 1863 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 E9PAM4 449 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 RIOK3O14730 519 aaKnown RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 APOL1O14791 398 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 TJP3O95049 919 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 PRAMEF12O95522 483 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 KLKB1P03952 638 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 TACR2P21452 398 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 AMPD1P23109 780 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 ZNF135P52742 658 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 MLLT6P55198 1093 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 NRG1Q02297 640 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 KLF1Q13351 362 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 AUHQ13825 339 aaKnown RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 DPYSQ14117 519 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 TFDP2Q14188 446 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 CBX2Q14781 532 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 MANEALQ5VSG8 457 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 RWDD4Q6NW29 188 aaKnown RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 POTEHQ6S545 545 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 BBS12Q6ZW61 710 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 ZNF572Q7Z3I7 529 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 DDX42Q86XP3 938 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 NPAS3Q8IXF0 933 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 PQLC3Q8N755 202 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 SH3RF2Q8TEC5 729 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 MAIP1Q8WWC4 291 aa16.87■□□□□ 0.29
SMAGP-202ENST00000398453 USP13Q92995 863 aaPredicted RBP16.87■□□□□ 0.29
SMAGP-202ENST00000398453 HAUS1Q96CS2 278 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms