RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 GRHL2Q6ISB3 625 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 CCDC144NLQ6NUI1 221 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 BBS12Q6ZW61 710 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 RASGRP2Q7LDG7 609 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 ZNF551Q7Z340 670 aaPredicted RBP3.14□□□□□ -1.91
CD47-203ENST00000398258 WDR53Q7Z5U6 358 aaPredicted RBP3.14□□□□□ -1.91
CD47-203ENST00000398258 CPOQ8IVL8 374 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 FSTL5Q8N475 847 aaPredicted RBP3.14□□□□□ -1.91
CD47-203ENST00000398258 LINC01465Q8N7H1 131 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TEX19Q8NA77 164 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 XAGE5Q8WWM1 108 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 PPM1MQ96MI6 270 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 PYM1Q9BRP8 204 aaKnown RBP3.14□□□□□ -1.91
CD47-203ENST00000398258 WASH6PQ9NQA3 447 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 ARHGEF3Q9NR81 526 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TMLHEQ9NVH6 421 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TMEM160Q9NX00 188 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 RRN3Q9NYV6 651 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 NDUFAF4Q9P032 175 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 SEMA5BQ9P283 1151 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 PI4KBQ9UBF8 816 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 SERGEFQ9UGK8 458 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 TMEM98Q9Y2Y6 226 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 UBE2J1Q9Y385 318 aaPredicted RBP3.14□□□□□ -1.91
CD47-203ENST00000398258 NOTCH4Q99466 2003 aa3.14□□□□□ -1.91
CD47-203ENST00000398258 HMX3A6NHT5 357 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 MBD3L5A6NJ08 208 aaPredicted RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 SLC38A8A6NNN8 435 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 ERVV-2B6SEH9 535 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PRRT4C9JH25 899 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 M0QZQ0 153 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PSMD9O00233 223 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 HOXC11O43248 304 aaPredicted RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 TMPRSS11DO60235 418 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 CNPP09543 421 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 DLDP09622 509 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 MYCLP12524 364 aaPredicted RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 NDUFB7P17568 137 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 ENGP17813 658 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 DRD4P21917 467 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 MMP8P22894 467 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 ADRA1DP25100 572 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 CYP2C18P33260 490 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 MAPK9P45984 424 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 CCT8P50990 548 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PAPOLAP51003 745 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 CCR5P51681 352 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PDE1AP54750 535 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 TBX2Q13207 712 aaPredicted RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 CUL4BQ13620 913 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 RALBP1Q15311 655 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 TIGD6Q17RP2 521 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 BTBD16Q32M84 506 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 KRTAP27-1Q3LI81 207 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 SUPT20HL1Q3ZLR7 823 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 FAM153CQ494X1 144 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 GALNTL6Q49A17 601 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 TMEM119Q4V9L6 283 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PLAC9Q5JTB6 97 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 MAP3K21Q5TCX8 1036 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 DGAT2L7PQ6IED9 249 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 ANKRD16Q6P6B7 361 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 DPY19L3Q6ZPD9 716 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PTCHD4Q6ZW05 846 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 Q6ZWC4 215 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 USP43Q70EL4 1123 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 MEPCEQ7L2J0 689 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 PARS2Q7L3T8 475 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 ZDHHC17Q8IUH5 632 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 TMTC1Q8IUR5 882 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 RBMXL3Q8N7X1 1067 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 C11orf44Q8N8P7 122 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PNPLA1Q8N8W4 532 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 ZBTB8BQ8NAP8 495 aaPredicted RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 USP38Q8NB14 1042 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 SMRP1Q8NCR6 262 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 NAXEQ8NCW5 288 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 SEMA6DQ8NFY4 1073 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 SLC2A12Q8TD20 617 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 SLC22A17Q8WUG5 538 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 ASB12Q8WXK4 309 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 CPT1BQ92523 772 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 RILPL2Q969X0 211 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 KAZALD1Q96I82 304 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 TRAPPC9Q96Q05 1148 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 TWNKQ96RR1 684 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 PRR25Q96S07 402 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 FSD1LQ9BXM9 530 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 SEPSECSQ9HD40 501 aaKnown RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 RIC8AQ9NPQ8 531 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 DLL3Q9NYJ7 618 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.13□□□□□ -1.91
CD47-203ENST00000398258 CCNL1Q9UK58 526 aaPredicted RBP3.13□□□□□ -1.91
CD47-203ENST00000398258 SLC13A4Q9UKG4 626 aa3.13□□□□□ -1.91
CD47-203ENST00000398258 RRN3P2A6NIE6 340 aa3.12□□□□□ -1.91
CD47-203ENST00000398258 TISP43B9A030 160 aa3.12□□□□□ -1.91
CD47-203ENST00000398258 E7EVH7 732 aa3.12□□□□□ -1.91
CD47-203ENST00000398258 H0YIZ8 118 aa3.12□□□□□ -1.91
CD47-203ENST00000398258 INSIG1O15503 277 aa3.12□□□□□ -1.91
CD47-203ENST00000398258 NKX2-8O15522 239 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms