RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 HS3ST4Q9Y661 456 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 MAP3K6O95382 1288 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 IGLV3-27P01718 113 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 PTPN7P35236 360 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 EPHA5P54756 1037 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 TPI1P60174 286 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 COG7P83436 770 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 CLUL1Q15846 466 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 TAZQ16635 292 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 PIK3R6Q5UE93 754 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 RWDD4Q6NW29 188 aaKnown RBP21.92■■□□□ 1.1
CPNE1-204ENST00000397443 NPNTQ6UXI9 565 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 ZNF572Q7Z3I7 529 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-204ENST00000397443 PRELID2Q8N945 189 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 LRCH3Q96II8 777 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 HAPLN3Q96S86 360 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 KLF16Q9BXK1 252 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-204ENST00000397443 SLC46A2Q9BY10 475 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 MFHAS1Q9Y4C4 1052 aa21.92■■□□□ 1.1
CPNE1-204ENST00000397443 TRAV19A0A0A6YYK7 116 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 H3BRJ5 948 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 MOSPD3O75425 235 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 STC2O76061 302 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 LRIG2O94898 1065 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 HARS2P49590 506 aaKnown RBP21.91■■□□□ 1.1
CPNE1-204ENST00000397443 RING1Q06587 406 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 C1orf228Q6PIY5 440 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 RFX8Q6ZV50 586 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 DENND1CQ8IV53 801 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 PQLC3Q8N755 202 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 FAM71BQ8TC56 605 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 BTN2A3PQ96KV6 586 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 EPAS1Q99814 870 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 ETNK2Q9NVF9 386 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 MRPS23Q9Y3D9 190 aaKnown RBP21.91■■□□□ 1.1
CPNE1-204ENST00000397443 XIRP2A4UGR9 3374 aa21.91■■□□□ 1.1
CPNE1-204ENST00000397443 GOLGA6L7A0A1B0GV03 622 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 CORO1AP31146 461 aaKnown RBP21.9■■□□□ 1.1
CPNE1-204ENST00000397443 ZXDBP98169 803 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 CBX2Q14781 532 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-204ENST00000397443 ARHGAP15Q53QZ3 475 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 RAP1GAP2Q684P5 730 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 NUGGCQ68CJ6 796 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 C14orf80Q86SX3 495 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 CCDC33Q8N5R6 958 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 EFHBQ8N7U6 833 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 NETO2Q8NC67 525 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 ITFG1Q8TB96 612 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 ZFRQ96KR1 1074 aaKnown RBP21.9■■□□□ 1.1
CPNE1-204ENST00000397443 DZANK1Q9NVP4 752 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 VANGL2Q9ULK5 521 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 EYSQ5T1H1 3165 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 APOL1O14791 398 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 FGF19O95750 216 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 CEBPBP17676 345 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 EPHB2P29323 1055 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 SEMA3BQ13214 749 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 ADGRE1Q14246 886 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 NAA30Q147X3 362 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-204ENST00000397443 MS4A13Q5J8X5 152 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 BBS12Q6ZW61 710 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 UNC45BQ8IWX7 931 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 MAIP1Q8WWC4 291 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 MAGOHBQ96A72 148 aaKnown RBP21.9■■□□□ 1.1
CPNE1-204ENST00000397443 RPGRIP1Q96KN7 1286 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 OSBPL2Q9H1P3 480 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 ARHGEF4Q9NR80 690 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 HEY1Q9Y5J3 304 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 C2orf16Q68DN1 1984 aa21.9■■□□□ 1.1
CPNE1-204ENST00000397443 OLFM2O95897 454 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 KLKB1P03952 638 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 PECAM1P16284 738 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-204ENST00000397443 TFDP2Q14188 446 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 PRSS36Q5K4E3 855 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 PLD4Q96BZ4 506 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 FAF2Q96CS3 445 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 HINFPQ9BQA5 517 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 MTCH2Q9Y6C9 303 aa21.89■■□□□ 1.09
CPNE1-204ENST00000397443 AVPR1AP37288 418 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 KCNJ1P48048 391 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 MLLT6P55198 1093 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-204ENST00000397443 NADSYN1Q6IA69 706 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 B4GALNT4Q76KP1 1039 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 CHSY1Q86X52 802 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 PLD5Q8N7P1 536 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 LEMD2Q8NC56 503 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 EPC1Q9H2F5 836 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 MPP6Q9NZW5 540 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 EFR3BQ9Y2G0 817 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 SPTBN5Q9NRC6 3674 aaKnown RBP21.88■■□□□ 1.09
CPNE1-204ENST00000397443 E9PAM4 449 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 TRDMT1O14717 391 aaKnown RBP21.88■■□□□ 1.09
CPNE1-204ENST00000397443 RHOXF2BP0C7M4 288 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 ERCC2P18074 760 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 OTUD4Q01804 1114 aaKnown RBP21.88■■□□□ 1.09
CPNE1-204ENST00000397443 AUHQ13825 339 aaKnown RBP21.88■■□□□ 1.09
CPNE1-204ENST00000397443 ANKRD54Q6NXT1 300 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 RFWD3Q6PCD5 774 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 CMTM8Q8IZV2 173 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 ACTL9Q8TC94 416 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms