RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 HS3ST4Q9Y661 456 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 A0A1W2PRU2 124 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 APOL1O14791 398 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 POU2F2P09086 479 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 PTPN2P17706 415 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 CDC25CP30307 473 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 KCNJ1P48048 391 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 FNTAP49354 379 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 ZNF135P52742 658 aaPredicted RBP28.43■■■□□ 2.14
CPNE1-203ENST00000397442 MLLT6P55198 1093 aaPredicted RBP28.43■■■□□ 2.14
CPNE1-203ENST00000397442 OTUD4Q01804 1114 aaKnown RBP28.43■■■□□ 2.14
CPNE1-203ENST00000397442 SNX1Q13596 522 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 GLE1Q53GS7 698 aaKnown RBP28.43■■■□□ 2.14
CPNE1-203ENST00000397442 NPNTQ6UXI9 565 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 ZFRQ96KR1 1074 aaKnown RBP28.43■■■□□ 2.14
CPNE1-203ENST00000397442 BTN2A3PQ96KV6 586 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 C1orf74Q96LT6 269 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 PRKD2Q9BZL6 878 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 TRPC7Q9HCX4 862 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 MFHAS1Q9Y4C4 1052 aa28.43■■■□□ 2.14
CPNE1-203ENST00000397442 LIASO43766 372 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 PAPLNO95428 1278 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 GJA1P17302 382 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 TPI1P60174 286 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 NRG1Q02297 640 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 KCTD19Q17RG1 926 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 NCBP2-AS2Q69YL0 99 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 DRICH1Q6PGQ1 229 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 TTC13Q8NBP0 860 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 SLC35B2Q8TB61 432 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 MRPS31Q92665 395 aaKnown RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 EPAS1Q99814 870 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 ATXN3LQ9H3M9 355 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 GKN1Q9NS71 199 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 DMGDHQ9UI17 866 aaKnown RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 CCDC195A0A1B0GUA6 201 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 XYLBO75191 536 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 MOSPD3O75425 235 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 TGM2P21980 687 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 PTGIRP43119 386 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 COG7P83436 770 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 NUGGCQ68CJ6 796 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 GPR161Q8N6U8 529 aaKnown RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 ARL14EPQ8N8R7 260 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 ATP6V0D2Q8N8Y2 350 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 SHKBP1Q8TBC3 707 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 CDCA3Q99618 268 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-203ENST00000397442 DNPEPQ9ULA0 475 aa28.42■■■□□ 2.14
CPNE1-203ENST00000397442 DCLK1O15075 740 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 STC2O76061 302 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 RHOP08100 348 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 SLC7A5Q01650 507 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 MS4A13Q5J8X5 152 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 STXBP5Q5T5C0 1151 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 C14orf80Q86SX3 495 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 ZNF683Q8IZ20 524 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 NKD2Q969F2 451 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-203ENST00000397442 PLD4Q96BZ4 506 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 TCEAL4Q96EI5 215 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 ZNF576Q9H609 170 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 PRDM16Q9HAZ2 1276 aa28.41■■■□□ 2.14
CPNE1-203ENST00000397442 TTI1O43156 1089 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 HDCP19113 662 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 HOXC13P31276 330 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 NOMO1Q15155 1222 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 OASLQ15646 514 aaKnown RBP28.4■■■□□ 2.14
CPNE1-203ENST00000397442 SLC5A9Q2M3M2 681 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 C1orf228Q6PIY5 440 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 UNC45BQ8IWX7 931 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 MAB21L3Q8N8X9 362 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 CCDC26Q8TAB7 109 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 SLCO2A1Q92959 643 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 WBP2Q969T9 261 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 SLC12A6Q9UHW9 1150 aa28.4■■■□□ 2.14
CPNE1-203ENST00000397442 FGF19O95750 216 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 MBL2P11226 248 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-203ENST00000397442 ZFXP17010 805 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-203ENST00000397442 ERCC2P18074 760 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 ZXDBP98169 803 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 DR1Q01658 176 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 GBE1Q04446 702 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 SLC10A2Q12908 348 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-203ENST00000397442 DHX34Q14147 1143 aaKnown RBP28.39■■■□□ 2.14
CPNE1-203ENST00000397442 NADSYN1Q6IA69 706 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 ELMSAN1Q6PJG2 1045 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 ADAMTS19Q8TE59 1207 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 P3H4Q92791 437 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 GCNAQ96QF7 691 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 PNKPQ96T60 521 aa28.39■■■□□ 2.14
CPNE1-203ENST00000397442 PRMT1Q99873 361 aaKnown RBP28.39■■■□□ 2.14
CPNE1-203ENST00000397442 FRMD8P1Q9BZ68 369 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-203ENST00000397442 KLKB1P03952 638 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 SRGAP2BP0DMP2 458 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 EPHB2P29323 1055 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 VCPP55072 806 aaKnown RBP28.38■■■□□ 2.13
CPNE1-203ENST00000397442 NTHL1P78549 312 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 BYSLQ13895 437 aaKnown RBP28.38■■■□□ 2.13
CPNE1-203ENST00000397442 LRIT3Q3SXY7 679 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 PRSS36Q5K4E3 855 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 PDZD4Q76G19 769 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms