RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TMEM5Q9Y2B1 443 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 MPOP05164 745 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 CASP9P55211 416 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ZBTB46Q86UZ6 589 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 APOL4Q9BPW4 351 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CHID1Q9BWS9 393 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PDP2Q9P2J9 529 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 SUCOQ9UBS9 1254 aaKnown RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 CCT8L1PA6NM43 557 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TBKBP1A7MCY6 615 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 FASP25445 335 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PTPN3P26045 913 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TGFBR2P37173 567 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PLD1Q13393 1074 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ACAP1Q15027 740 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 MZT2AQ6P582 158 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 TERB1Q8NA31 727 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ATL1Q8WXF7 558 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 NOD2Q9HC29 1040 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ADPRHL2Q9NX46 363 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CCDC182A6NF36 153 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CLK3P49761 638 aaKnown RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
SMU1-201ENST00000397149 DGUOKQ16854 277 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 RAD51AP1Q96B01 352 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 NSMCE2Q96MF7 247 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 CGRRF1Q99675 332 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ADGRE3Q9BY15 652 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 ZNF232Q9UNY5 417 aa12.61□□□□□ -0.39
SMU1-201ENST00000397149 PNMA8CA0A1B0GUJ8 204 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 FOXN1O15353 648 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 EPHB3P54753 998 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 SLC29A2Q14542 456 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 POU6F1Q14863 301 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 CTXN3Q4LDR2 81 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 ZNF655Q8N720 491 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 OR52L1Q8NGH7 329 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 CHP1Q99653 195 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 PHF24Q9UPV7 400 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 HMGXB3Q12766 1538 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 RAD51CO43502 376 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 TSPAN1O60635 241 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 MTA2O94776 668 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 CRTAMO95727 393 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 KLRC2P26717 231 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 KPNB1Q14974 876 aaKnown RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 EMC2Q15006 297 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 ABCB10Q9NRK6 738 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 MAGEB3O15480 346 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 HSD3B1P14060 373 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 TPH1P17752 444 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 ATG9AQ7Z3C6 839 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 RNF180Q86T96 592 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 ACOT1Q86TX2 421 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 SLC20A1Q8WUM9 679 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 IRX2Q9BZI1 471 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 TOP3BO95985 862 aaKnown RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 PPP1R26Q5T8A7 1209 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 FRMD5Q7Z6J6 570 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 TRAPPC5Q8IUR0 188 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 CCDC177Q9NQR7 707 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 PDGFCQ9NRA1 345 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 GPN3Q9UHW5 284 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 CCDC162PA2VCL2 907 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 TFPIP10646 304 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 ACADSP16219 412 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 GJA8P48165 433 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 MYBPC2Q14324 1141 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 OCLNQ16625 522 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 PERM1Q5SV97 790 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 GJB7Q6PEY0 223 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 ABCG8Q9H221 673 aa12.6□□□□□ -0.39
SMU1-201ENST00000397149 AAR2Q9Y312 384 aaKnown RBP12.6□□□□□ -0.39
SMU1-201ENST00000397149 MAFKO60675 156 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 GLRA3O75311 464 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 RAB25P57735 213 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 PPP1R18Q6NYC8 613 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 RAB11FIP2Q7L804 512 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 JAMLQ86YT9 394 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 DEFB107AQ8IZN7 70 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 S100ZQ8WXG8 99 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 FATE1Q969F0 183 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 TEKT5Q96M29 485 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ADGRA3Q8IWK6 1321 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms