RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 F11P03951 625 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 ETS1P14921 441 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 ARL4AP40617 200 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 PIK3R6Q5UE93 754 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 EMBQ6PCB8 327 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 PRMT1Q99873 361 aaKnown RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 YBX2Q9Y2T7 364 aaKnown RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 HS3ST4Q9Y661 456 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 LRIG2O94898 1065 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 KRT14P02533 472 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 HTR7P34969 479 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 PCDHA11Q9Y5I1 949 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 GRM6O15303 877 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 CREB3O43889 395 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 MFSD11O43934 449 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 TLR5O60602 858 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 GAS8O95995 478 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 SPATA31D3P0C874 917 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 PPP3CCP48454 512 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 MLLT6P55198 1093 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 TBX4P57082 545 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ERVK-21P61565 698 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 SPATA31D4Q6ZUB0 917 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 MREGQ8N565 214 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 QKIQ96PU8 341 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 CDK5RAP1Q96SZ6 601 aaKnown RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 FAM129AQ9BZQ8 928 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 MARCH2Q9P0N8 246 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 HELZP42694 1942 aaKnown RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 PRRG1O14668 218 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 COCHO43405 550 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ADH1AP07327 375 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 CA3P07451 260 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 RBP3P10745 1247 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ERCC2P18074 760 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 IRS1P35568 1242 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 PPP1R7Q15435 360 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 MAP9Q49MG5 647 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 NPWQ8N729 165 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-204ENST00000396548 TRIM31Q9BZY9 425 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
TRIM39-204ENST00000396548 REV3LO60673 3130 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 IGLV3-10A0A075B6K4 115 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 SLC2A3P11169 496 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 ITIH2P19823 946 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 PLD1Q13393 1074 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 PRKD1Q15139 912 aaPredicted RBP13.13□□□□□ -0.31
TRIM39-204ENST00000396548 C10orf120Q5SQS8 335 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 C14orf80Q86SX3 495 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 SNF8Q96H20 258 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 GDF15Q99988 308 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 WASH4PA8MWX3 477 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 MCF2LO15068 1137 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 OLFM2O95897 454 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 EPHB3P54753 998 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 TRIP13Q15645 432 aaPredicted RBP13.13□□□□□ -0.31
TRIM39-204ENST00000396548 MS4A13Q5J8X5 152 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 AFMIDQ63HM1 303 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
TRIM39-204ENST00000396548 B4GALNT4Q76KP1 1039 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 TP53INP2Q8IXH6 220 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 FBXO25Q8TCJ0 367 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 ZFRQ96KR1 1074 aaKnown RBP13.13□□□□□ -0.31
TRIM39-204ENST00000396548 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 ZMYND15Q9H091 742 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 RNF38Q9H0F5 515 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
TRIM39-204ENST00000396548 HEY1Q9Y5J3 304 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 RAD54BQ9Y620 910 aa13.13□□□□□ -0.31
TRIM39-204ENST00000396548 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
TRIM39-204ENST00000396548 ELF1P32519 619 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 TPI1P60174 286 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 C5orf22Q49AR2 442 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 RTL10Q7L3V2 364 aa13.12□□□□□ -0.31
TRIM39-204ENST00000396548 ZC3H18Q86VM9 953 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms