RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 BOLA2-SMG1P6H3BVE0 249 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ZBTB14O43829 449 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 SNNO75324 88 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 METTL18O95568 372 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 EDN1P05305 212 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TFPTP0C1Z6 253 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PDGFRAP16234 1089 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 XRCC1P18887 633 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 FUT4P22083 530 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CAP2P40123 477 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 MYBPC1Q00872 1141 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 KRT76Q01546 638 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 MTA1Q13330 715 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TBCCQ15814 346 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ZNF699Q32M78 642 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 SLC9B1Q4ZJI4 515 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 RARS2Q5T160 578 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 DUS1LQ6P1R4 473 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 KLC3Q6P597 504 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CLEC4DQ8WXI8 215 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TMA16Q96EY4 203 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CCT7Q99832 543 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 C1orf21Q9H246 121 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ZDHHC7Q9NXF8 308 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 BTBD7Q9P203 1132 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 FZD1Q9UP38 647 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PHIPQ8WWQ0 1821 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ADCY6O43306 1168 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PRPSAP2O60256 369 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 DGAT1O75907 488 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TRUB2O95900 331 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 RALBP11234 206 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 FGF3P11487 239 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ARRB2P32121 409 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CRHR1P34998 444 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 STT3AP46977 705 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PRAMEP78395 509 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CDKL1Q00532 357 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 WDR78Q5VTH9 848 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 MCPH1Q8NEM0 835 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 BHLHE22Q8NFJ8 381 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ACTRT2Q8TDY3 377 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ATP6V0A1Q93050 837 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ATP2A3Q93084 1043 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 KLRG1Q96E93 195 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CGRRF1Q99675 332 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 SIKE1Q9BRV8 207 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 NTPCRQ9BSD7 190 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CCDC28BQ9BUN5 200 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 UNKQ9C0B0 810 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 COG4Q9H9E3 785 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 NDUFA13Q9P0J0 144 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TMEM216Q9P0N5 145 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 SEPT10Q9P0V9 454 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PAK5Q9P286 719 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 SSX2IPQ9Y2D8 614 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 MYO18AQ92614 2054 aaKnown RBP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 SF3B1O75533 1304 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 M0QYV0 167 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 WNT10BO00744 389 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 TRMUO75648 421 aaKnown RBP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 LYPLA2O95372 231 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 STAMBPO95630 424 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 ICAM1P05362 532 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 FAM58BPP0C7Q3 252 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 SLC5A2P31639 672 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 CCR10P46092 362 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 HSD17B4P51659 736 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 KLF10Q13118 480 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 SNAPC2Q13487 334 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 TUBB3Q13509 450 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 DCTN2Q13561 401 aaKnown RBP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 PDE1CQ14123 709 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 GRM2Q14416 872 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 EMC2Q15006 297 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 FAM91A1Q658Y4 838 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 MBLAC2Q68D91 279 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 FAM160B2Q86V87 743 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 ZNF781Q8N8C0 355 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 ZNF512Q96ME7 567 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 OR52B2Q96RD2 323 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 KCNK16Q96T55 309 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 PDCD2LQ9BRP1 358 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 DHX35Q9H5Z1 703 aaKnown RBP10.11□□□□□ -0.79
TRIM39-203ENST00000396547 NRDE2Q9H7Z3 1164 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 PLAC1Q9HBJ0 212 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 FEM1BQ9UK73 627 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 DOLKQ9UPQ8 538 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 AFG3L2Q9Y4W6 797 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 PSAT1Q9Y617 370 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 TCRBV5S1A1TA0A578 114 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 SPAG6O75602 509 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 IMPDH2P12268 514 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 EPHA3P29320 983 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 MLH1P40692 756 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 SERPINB8P50452 374 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 CCR3P51677 355 aa10.11□□□□□ -0.79
TRIM39-203ENST00000396547 THOP1P52888 689 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms