RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 KRT38O76015 456 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 ERCC2P18074 760 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 COG7P83436 770 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 TRIM71Q2Q1W2 868 aaKnown RBP16.64■□□□□ 0.26
SNX6-202ENST00000396526 KBTBD12Q3ZCT8 623 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 MAP3K21Q5TCX8 1036 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 PM20D1Q6GTS8 502 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 BEND5Q7L4P6 421 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 EDEM1Q92611 657 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 CDKL2Q92772 493 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 P2RY11Q96G91 374 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 FOXO6A8MYZ6 492 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 TM9SF1O15321 606 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 AVILO75366 819 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 TRPA1O75762 1119 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 METTL18O95568 372 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 DENND5BQ6ZUT9 1274 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 ZNF598Q86UK7 904 aaKnown RBP16.64■□□□□ 0.25
SNX6-202ENST00000396526 CD99L2Q8TCZ2 262 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 MAGEB5Q9BZ81 275 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 ABCC13Q9NSE7 274 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 SNX3O60493 162 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 LIG3P49916 1009 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 MPP2Q14168 576 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 TTC39BQ5VTQ0 682 aaPredicted RBP16.64■□□□□ 0.25
SNX6-202ENST00000396526 EBNA1BP2Q99848 306 aaKnown RBP16.64■□□□□ 0.25
SNX6-202ENST00000396526 DHRS4Q9BTZ2 278 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 SEZ6LQ9BYH1 1024 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 TKTL2Q9H0I9 626 aa16.64■□□□□ 0.25
SNX6-202ENST00000396526 SDR42E2A6NKP2 422 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 APOEP02649 317 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 FYNP06241 537 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 SNRPAP09012 282 aaKnown RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 EPHB2P29323 1055 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 OR1G1P47890 313 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 CXCR3P49682 368 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 GPRIN1Q7Z2K8 1008 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 CCDC33Q8N5R6 958 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 GSDMBQ8TAX9 411 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 KDM4CQ9H3R0 1056 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 EIF2B3Q9NR50 452 aaKnown RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 OR12D3Q9UGF7 316 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 INPPL1O15357 1258 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 TADA2AO75478 443 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 COL6A1P12109 1028 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 DPYSQ14117 519 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 ZKSCAN8Q15776 578 aaPredicted RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 OTUD1Q5VV17 481 aaPredicted RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 ITPRIPL1Q6GPH6 555 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 SPATA21Q7Z572 469 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 CAND1Q86VP6 1230 aaKnown RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 GBP7Q8N8V2 638 aaPredicted RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 WDR6Q9NNW5 1121 aaKnown RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 HHLA1C9JL84 531 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 ASMTLO95671 621 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 SERPINB9P50453 376 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 PRKD1Q15139 912 aaPredicted RBP16.63■□□□□ 0.25
SNX6-202ENST00000396526 SCN4BQ8IWT1 228 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 VAT1Q99536 393 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 RTP3Q9BQQ7 232 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 TRPV6Q9H1D0 765 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 ARL2BPQ9Y2Y0 163 aa16.63■□□□□ 0.25
SNX6-202ENST00000396526 A0A1W2PPM1 405 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 BFSP2Q13515 415 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 FAM43BQ6ZT52 329 aaPredicted RBP16.62■□□□□ 0.25
SNX6-202ENST00000396526 IGDCC3Q8IVU1 814 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 LRRN4Q8WUT4 740 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 MTBPQ96DY7 904 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 ZNF180Q9UJW8 692 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 TRHDEQ9UKU6 1024 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 DCLK1O15075 740 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.252e-7■■■□□ 15.4
SNX6-202ENST00000396526 BRMS1LQ5PSV4 323 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 OSBPL7Q9BZF2 842 aa16.62■□□□□ 0.25
SNX6-202ENST00000396526 LPXNO60711 386 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 ALDH3A1P30838 453 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 RPA3P35244 121 aaPredicted RBP16.61■□□□□ 0.25
SNX6-202ENST00000396526 RABGGTBP53611 331 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 CACNA2D1P54289 1103 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 LVRNQ6Q4G3 990 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 SLAIN1Q8ND83 568 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 IGSF9Q9P2J2 1179 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 TRIM66O15016 1216 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 WDR4P57081 412 aaKnown RBP16.61■□□□□ 0.25
SNX6-202ENST00000396526 PRPSAP1Q14558 356 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 PDK4Q16654 411 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 LRRC8BQ6P9F7 803 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 PDCD7Q8N8D1 485 aaKnown RBP16.61■□□□□ 0.25
SNX6-202ENST00000396526 DQX1Q8TE96 717 aaKnown RBP16.61■□□□□ 0.25
SNX6-202ENST00000396526 DENND1AQ8TEH3 1009 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 TXNDC16Q9P2K2 825 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 CASP8AP2Q9UKL3 1982 aa16.61■□□□□ 0.25
SNX6-202ENST00000396526 ERI2A8K979 691 aaKnown RBP16.61■□□□□ 0.25
SNX6-202ENST00000396526 AP3B1O00203 1094 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms