RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 TNS4Q8IZW8 715 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 ZNF276Q8N554 614 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 GIPC2Q8TF65 315 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 UBLCP1Q8WVY7 318 aaPredicted RBP13.87□□□□□ -0.19
CLIC1-209ENST00000395892 FCRL2Q96LA5 508 aaPredicted RBP13.87□□□□□ -0.19
CLIC1-209ENST00000395892 QKIQ96PU8 341 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLIC1-209ENST00000395892 TSPYL1Q9H0U9 437 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 TMBIM4Q9HC24 238 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLIC1-209ENST00000395892 TMEM51Q9NW97 253 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 HSFX1Q9UBD0 423 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 OR12D3Q9UGF7 316 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
CLIC1-209ENST00000395892 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
CLIC1-209ENST00000395892 C5orf60A6NFR6 353 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 HACD1B0YJ81 288 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 ALOX15BO15296 676 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 KCNN4O15554 427 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 MFSD11O43934 449 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 PAGE1O75459 146 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 LRIG2O94898 1065 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 FGBP02675 491 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 SHBGP04278 402 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 VAV1P15498 845 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 HMGA1P17096 107 aaKnown RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 HOXC13P31276 330 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 TIE1P35590 1138 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 MAGEA6P43360 314 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 TUFMP49411 452 aaKnown RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 GLUD2P49448 558 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 NRG1Q02297 640 aaPredicted RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 RAB33AQ14088 237 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 SLC29A2Q14542 456 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 PRKD1Q15139 912 aaPredicted RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 TMEM240Q5SV17 173 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 TPGS2Q68CL5 300 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 PCGF5Q86SE9 256 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 PPIL6Q8IXY8 311 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 GPR65Q8IYL9 337 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 ZNF683Q8IZ20 524 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 NETO2Q8NC67 525 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 ZNF461Q8TAF7 563 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 BADQ92934 168 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 SEPT5Q99719 369 aaPredicted RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 TMEM109Q9BVC6 243 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 UBE2OQ9C0C9 1292 aaKnown RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 MCOLN1Q9GZU1 580 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 CDC42EP4Q9H3Q1 356 aaKnown RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 NINJ2Q9NZG7 142 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 ZMYND8Q9ULU4 1186 aaPredicted RBP13.86□□□□□ -0.19
CLIC1-209ENST00000395892 SHOC2Q9UQ13 582 aa13.86□□□□□ -0.19
CLIC1-209ENST00000395892 POLR3GO15318 223 aaPredicted RBP13.85□□□□□ -0.19
CLIC1-209ENST00000395892 RNF40O75150 1001 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 GJB5O95377 273 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 TTC4O95801 387 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 TBX18O95935 607 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 IGLV3-27P01718 113 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 CCR1P32246 355 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 PSEN1P49768 467 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 KCNJ11Q14654 390 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 CEP85LQ5SZL2 805 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 C14orf80Q86SX3 495 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 HOOK3Q86VS8 718 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 CCDC33Q8N5R6 958 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 DPF3Q92784 378 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 FBXO32Q969P5 355 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 C1orf74Q96LT6 269 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 PAK5Q9P286 719 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
CLIC1-209ENST00000395892 TLR6Q9Y2C9 796 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 RAD54BQ9Y620 910 aa13.85□□□□□ -0.19
CLIC1-209ENST00000395892 CARNS1A5YM72 827 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 GOLGA8KD6RF30 607 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 E7ESA3 106 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 C2CD2LO14523 706 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 NDC80O14777 642 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 TMEM63AO94886 807 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 METTL18O95568 372 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 MAGEA4P43358 317 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 TPI1P60174 286 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 PPIGQ13427 754 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■□□□□ 8.2
CLIC1-209ENST00000395892 KYNUQ16719 465 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 MSS51Q4VC12 460 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 FNBP1LQ5T0N5 605 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 KIAA1841Q6NSI8 718 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 BZW1Q7L1Q6 419 aaKnown RBP13.84□□□□□ -0.19
CLIC1-209ENST00000395892 CCDC25Q86WR0 208 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 NPWQ8N729 165 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 ZSCAN18Q8TBC5 510 aaPredicted RBP13.84□□□□□ -0.19
CLIC1-209ENST00000395892 CCDC110Q8TBZ0 833 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 TFB1MQ8WVM0 346 aaKnown RBP13.84□□□□□ -0.19
CLIC1-209ENST00000395892 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
CLIC1-209ENST00000395892 RNF34Q969K3 372 aa13.84□□□□□ -0.19
CLIC1-209ENST00000395892 TMEM169Q96HH4 297 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms