RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MEA1Q16626 185 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 UBAP2Q5T6F2 1119 aaKnown RBP5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 KRBA2Q6ZNG9 492 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 BEND2Q8NDZ0 799 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 NGDNQ8NEJ9 315 aaKnown RBP5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 ZMIZ2Q8NF64 920 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 KCNG4Q8TDN1 519 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 CREB3L4Q8TEY5 395 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 ERP27Q96DN0 273 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 ELP4Q96EB1 424 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 RNFT2Q96EX2 444 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 EDC3Q96F86 508 aaKnown RBP5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 FBXL20Q96IG2 436 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 LOXL4Q96JB6 756 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 LENG8Q96PV6 779 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 SERINC2Q96SA4 455 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 AIFM2Q9BRQ8 373 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 BDH2Q9BUT1 245 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 TAOK3Q9H2K8 898 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 TTYH1Q9H313 450 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 PDE11AQ9HCR9 933 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 SEMA4BQ9NPR2 832 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 CD207Q9UJ71 328 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 FZD1Q9UP38 647 aa5.55□□□□□ -1.52
HMGB1P10-201ENST00000395823 ANKRD18BA2A2Z9 1011 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 NPIPB13A6NJU9 1138 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 NPIPB5A8MRT5 1133 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 NPIPB4C9JG80 1138 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 CES2O00748 559 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SUV39H1O43463 412 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 NXPH3O95157 252 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 HSP90AA1P07900 732 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 NR2F6P10588 404 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 ITGAMP11215 1152 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 ZNF37AP17032 561 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 EPHA8P29322 1005 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 MAPK4P31152 587 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 POLD2P49005 469 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 PDE1AP54750 535 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 DRG2P55039 364 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 RPP30P78346 268 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 CDK18Q07002 472 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 LMAN2Q12907 356 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 BMPR2Q13873 1038 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 CDSNQ15517 529 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 NFIL3Q16649 462 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SNX30Q5VWJ9 437 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 KYAT3Q6YP21 454 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 TMTC3Q6ZXV5 915 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 BRINP3Q76B58 766 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SIRT6Q8N6T7 355 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 RP9Q8TA86 221 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 KAZALD1Q96I82 304 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 RSRC1Q96IZ7 334 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 Q96MF0 132 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 CLSTN3Q9BQT9 956 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 THAP7Q9BT49 309 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SLC25A18Q9H1K4 315 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 MROH8Q9H579 483 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SYNPO2LQ9H987 977 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SMYD2Q9NRG4 433 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 ABHD10Q9NUJ1 306 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 PARPBPQ9NWS1 579 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 MTMR4Q9NYA4 1195 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 DLL3Q9NYJ7 618 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 MGAT4CQ9UBM8 478 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SLC25A10Q9UBX3 287 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 TESQ9UGI8 421 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 POLG2Q9UHN1 485 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 CNOT7Q9UIV1 285 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 AMFRQ9UKV5 643 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 VPS4AQ9UN37 437 aa5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 TDRD9Q8NDG6 1382 aaKnown RBP5.54□□□□□ -1.52
HMGB1P10-201ENST00000395823 SETD1BQ9UPS6 1966 aaKnown RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 TNPO2O14787 897 aaKnown RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 ZBED4O75132 1171 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 PTP4A3O75365 173 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 MLYCDO95822 493 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 C1SP09871 688 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 WEE2P0C1S8 567 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 ARSAP15289 507 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 MATN1P21941 496 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 PCP4P48539 62 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 JAK3P52333 1124 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 TXNL4AP83876 142 aaKnown RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 PTP4A2Q12974 167 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 GAB1Q13480 694 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 TBCEQ15813 527 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 TIGD2Q4W5G0 525 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 USP39Q53GS9 565 aaKnown RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 FAM69AQ5T7M9 428 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 NAA35Q5VZE5 725 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 WDR93Q6P2C0 686 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 USP51Q70EK9 711 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 C1orf210Q8IVY1 113 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 CACTINQ8WUQ7 758 aaKnown RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 TFAP2BQ92481 460 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms