RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 KCTD19Q17RG1 926 aaPredicted RBP19.98■□□□□ 0.79
LMNB1-202ENST00000395354 OTUD1Q5VV17 481 aaPredicted RBP19.98■□□□□ 0.79
LMNB1-202ENST00000395354 ELMSAN1Q6PJG2 1045 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 RTL10Q7L3V2 364 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 VN1R2Q8NFZ6 395 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 GPR152Q8TDT2 470 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 UBLCP1Q8WVY7 318 aaPredicted RBP19.98■□□□□ 0.79
LMNB1-202ENST00000395354 PABPC3Q9H361 631 aaKnown RBP19.98■□□□□ 0.79
LMNB1-202ENST00000395354 GPATCH2LQ9NWQ4 482 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 ATP8A1Q9Y2Q0 1164 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 SZT2Q5T011 3432 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 M0QYT0 321 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 SGK1O00141 431 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 RNF40O75150 1001 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 F9P00740 461 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 USP17L7P0C7H9 530 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 ATF6P18850 670 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 STIP1P31948 543 aaKnown RBP19.97■□□□□ 0.79
LMNB1-202ENST00000395354 DEUP1Q05D60 604 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 TWF1Q12792 350 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 CA9Q16790 459 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 PPM1LQ5SGD2 360 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 IZUMO3Q5VZ72 239 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 HIBCHQ6NVY1 386 aaPredicted RBP19.97■□□□□ 0.79
LMNB1-202ENST00000395354 HFE2Q6ZVN8 426 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 BHLHA9Q7RTU4 235 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 MICALL1Q8N3F8 863 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 PQLC3Q8N755 202 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 PLD5Q8N7P1 536 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 PCDH19Q8TAB3 1148 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 NTAN1Q96AB6 310 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 SPATA17Q96L03 361 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 TMEM121Q9BTD3 319 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 DHX35Q9H5Z1 703 aaKnown RBP19.97■□□□□ 0.79
LMNB1-202ENST00000395354 NFS1Q9Y697 457 aa19.97■□□□□ 0.79
LMNB1-202ENST00000395354 DNALI1O14645 258 aaPredicted RBP19.96■□□□□ 0.79
LMNB1-202ENST00000395354 POLR3GO15318 223 aaPredicted RBP19.96■□□□□ 0.79
LMNB1-202ENST00000395354 LRG1P02750 347 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 PECAM1P16284 738 aaPredicted RBP19.96■□□□□ 0.79
LMNB1-202ENST00000395354 ATXN1P54253 815 aaKnown RBP19.96■□□□□ 0.79
LMNB1-202ENST00000395354 EPHB3P54753 998 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 PLD1Q13393 1074 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 SYPL2Q5VXT5 272 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 TMEM184AQ6ZMB5 413 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 TRMT10CQ7L0Y3 403 aaKnown RBP19.96■□□□□ 0.79
LMNB1-202ENST00000395354 PCGF5Q86SE9 256 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 CCDC185Q8N715 623 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 GIPC2Q8TF65 315 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 RSAD2Q8WXG1 361 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 CASP10Q92851 521 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 GUCD1Q96NT3 240 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 TMEM51Q9NW97 253 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 MTMR10Q9NXD2 777 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 CALCOCO1Q9P1Z2 691 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 SAE1Q9UBE0 346 aaPredicted RBP19.96■□□□□ 0.79
LMNB1-202ENST00000395354 NAALADL1Q9UQQ1 740 aa19.96■□□□□ 0.79
LMNB1-202ENST00000395354 CFAP69A5D8W1 941 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 LINC01565O15544 149 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 RFPL2O75678 378 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 NUDT17P0C025 328 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 RBP3P10745 1247 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 NR2C2P49116 596 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 ADAM15Q13444 863 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 P3H1Q32P28 736 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 RELL1Q8IUW5 271 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 NUP93Q8N1F7 819 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 CEP295NLQ96MC4 621 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 KCTD15Q96SI1 283 aaPredicted RBP19.95■□□□□ 0.78
LMNB1-202ENST00000395354 TPX2Q9ULW0 747 aaKnown RBP19.95■□□□□ 0.78
LMNB1-202ENST00000395354 PATJQ8NI35 1801 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 SMAPO00193 183 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 TNFRSF10BO14763 440 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 SRGAP2BP0DMP2 458 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 NCAM1P13591 858 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 ARL4AP40617 200 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 SCAPQ12770 1279 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 VEPH1Q14D04 833 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 MORF4L2Q15014 288 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 PPP6R3Q5H9R7 873 aaPredicted RBP19.95■□□□□ 0.78
LMNB1-202ENST00000395354 DENND5BQ6ZUT9 1274 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 FAM131BQ86XD5 332 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 STKLD1Q8NE28 680 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 VPS18Q9P253 973 aa19.95■□□□□ 0.78
LMNB1-202ENST00000395354 GOLGA6L10A6NI86 522 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 SLC38A8A6NNN8 435 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 GLP2RO95838 553 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 HNRNPA1P09651 372 aaKnown RBP eCLIP19.94■□□□□ 0.78
LMNB1-202ENST00000395354 FOSL2P15408 326 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 VPS41P49754 854 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 ZNF135P52742 658 aaPredicted RBP19.94■□□□□ 0.78
LMNB1-202ENST00000395354 GPS1Q13098 491 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 XRCC4Q13426 336 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 TAF12Q16514 161 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 EFHC2Q5JST6 749 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 DENND2CQ68D51 928 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 DNAJB7Q7Z6W7 309 aaPredicted RBP19.94■□□□□ 0.78
LMNB1-202ENST00000395354 CROCCP2Q86T23 111 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 ZCCHC9Q8N567 271 aaKnown RBP19.94■□□□□ 0.78
LMNB1-202ENST00000395354 SCAMP5Q8TAC9 235 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 ZNF512Q96ME7 567 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms