RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ADAM7Q9H2U9 754 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 C20orf96Q9NUD7 363 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 CNTN3Q9P232 1028 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC12A8A0AV02 714 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 KRT38O76015 456 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 INHAP05111 366 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 BGNP21810 368 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 KLRC2P26717 231 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 MPP2Q14168 576 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 OASLQ15646 514 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 GPATCH11Q8N954 259 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 HSFY1Q96LI6 401 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 DTLQ9NZJ0 730 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 TUBP50607 506 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 CHSY1Q86X52 802 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 CFAP52Q8N1V2 620 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SPATA6LQ8N4H0 392 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 C12orf50Q8NA57 414 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 EPB41L4BQ9H329 900 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 PIRO00625 290 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 XPO1O14980 1071 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 INCA1Q0VD86 236 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 DUSP4Q13115 394 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SPATA22Q8NHS9 363 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 NKD2Q969F2 451 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 KLHL5Q96PQ7 755 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SMOQ99835 787 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SP110Q9HB58 689 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 ARHGEF4Q9NR80 690 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 PPARGC1AQ9UBK2 798 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 PHTF1Q9UMS5 762 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 ALDH2P05091 517 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 ALDH7A1P49419 539 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC10A2Q12908 348 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC1A5Q15758 541 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC25A52Q3SY17 297 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC26A9Q7LBE3 791 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 OTOP3Q7RTS5 596 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 EXOC2Q96KP1 924 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 ZBED2Q9BTP6 218 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 DRG1Q9Y295 367 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC45A1Q9Y2W3 748 aa16.37■□□□□ 0.21
SMARCD1-202ENST00000394963 CCL22O00626 93 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 UBOX5O94941 541 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 L1CAMP32004 1257 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 ADRA1BP35368 520 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 CCNYL1Q8N7R7 359 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 HIPK4Q8NE63 616 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 AZIN2Q96A70 460 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 COLEC11Q9BWP8 271 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC4A5Q9BY07 1137 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC12A6Q9UHW9 1150 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC39A10Q9ULF5 831 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 TRIM33Q9UPN9 1127 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 USP15Q9Y4E8 981 aaPredicted RBP16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 ELF1P32519 619 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 PQLC3Q8N755 202 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 PPP4R1Q8TF05 950 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 EMID1Q96A84 441 aaPredicted RBP16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC10A3P09131 477 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 NCF2P19878 526 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 KCNA4P22459 653 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 TARSP26639 723 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 TUSC3Q13454 348 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 RBM22Q9NW64 420 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 MT-CYBP00156 380 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 APOEP02649 317 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 RPSAP08865 295 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 TGM2P21980 687 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 LPIN1Q14693 890 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 NOMO2Q5JPE7 1267 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 EP400NLQ6ZTU2 488 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 TRPM8Q7Z2W7 1104 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 EIF1ADQ8N9N8 165 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 MCUR1Q96AQ8 359 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 LRRC37BQ96QE4 947 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 NT5MQ9NPB1 228 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 TMLHEQ9NVH6 421 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC5A3P53794 718 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 THOC5Q13769 683 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 PSMD5Q16401 504 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 PPP1R15BQ5SWA1 713 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 CERCAMQ5T4B2 595 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 PRSS55Q6UWB4 352 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 TTC9BQ8N6N2 239 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 SMC1BQ8NDV3 1235 aa16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 ST13P5Q8NFI4 369 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-202ENST00000394963 A0A1W2PQH9 124 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 LRIG2O94898 1065 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 NFKB1P19838 968 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 MMP13P45452 471 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 CXCR3P49682 368 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 RPL10AP62906 217 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms