RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 TNIP3Q96KP6 325 aa17.16■□□□□ 0.34
PRDM5-202ENST00000394435 C20orf27Q9GZN8 174 aa17.16■□□□□ 0.34
PRDM5-202ENST00000394435 MYO18AQ92614 2054 aaKnown RBP17.16■□□□□ 0.34
PRDM5-202ENST00000394435 SDR42E2A6NKP2 422 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 GYG2O15488 501 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 TREHO43280 583 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 BPGMP07738 259 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 ESRRAP11474 423 aaPredicted RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 YBX3P16989 372 aaKnown RBP eCLIP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 IGFBP6P24592 240 aaPredicted RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 GTF2A2P52657 109 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 NME3Q13232 169 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 SYPL2Q5VXT5 272 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 LRRC8BQ6P9F7 803 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 C4orf50Q6ZRC1 276 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 LIMS2Q7Z4I7 341 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 TP53INP2Q8IXH6 220 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 CCNYQ8ND76 341 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 HNRNPABQ99729 332 aaKnown RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 DUSP16Q9BY84 665 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 GEMIN8Q9NWZ8 242 aaKnown RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 KCNK4Q9NYG8 393 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 SLC45A1Q9Y2W3 748 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 H3BRJ5 948 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 M0QYT0 321 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 XPOTO43592 962 aaKnown RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 PSMB4P28070 264 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 AXLP30530 894 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 CCNG1P51959 295 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 LILRA4P59901 499 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 MFSD10Q14728 455 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 C16orf46Q6P387 395 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 DSTYKQ6XUX3 929 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 TIFABQ6ZNK6 161 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 HFE2Q6ZVN8 426 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 BZW1Q7L1Q6 419 aaKnown RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 NME8Q8N427 588 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 RCOR3Q9P2K3 495 aaPredicted RBP17.15■□□□□ 0.34
PRDM5-202ENST00000394435 IPPQ9Y573 584 aa17.15■□□□□ 0.34
PRDM5-202ENST00000394435 ALDH1A2O94788 518 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 MLNP12872 115 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 NIPAL4Q0D2K0 466 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.34
PRDM5-202ENST00000394435 XKR4Q5GH76 650 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 PAQR9Q6ZVX9 377 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 MARK2Q7KZI7 788 aaKnown RBP17.14■□□□□ 0.34
PRDM5-202ENST00000394435 FBXO41Q8TF61 875 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 DNAI2Q9GZS0 605 aa17.14■□□□□ 0.34
PRDM5-202ENST00000394435 OPHN1O60890 802 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 STK10O94804 968 aaKnown RBP17.14■□□□□ 0.33
PRDM5-202ENST00000394435 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
PRDM5-202ENST00000394435 NOS2P35228 1153 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 CPA2P48052 419 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 AQP5P55064 265 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 NAA25Q14CX7 972 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 KHDC1Q4VXA5 237 aaKnown RBP17.14■□□□□ 0.33
PRDM5-202ENST00000394435 PACS1Q6VY07 963 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 CYS1Q717R9 158 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 ANKRD23Q86SG2 305 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 CRLF3Q8IUI8 442 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 ENDOVQ8N8Q3 282 aaKnown RBP17.14■□□□□ 0.33
PRDM5-202ENST00000394435 SMG8Q8ND04 991 aaKnown RBP17.14■□□□□ 0.33
PRDM5-202ENST00000394435 NPY6RQ99463 290 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 MED10Q9BTT4 135 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 PRDM12Q9H4Q4 367 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 LRRC4Q9HBW1 653 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 XPNPEP3Q9NQH7 507 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 TAS2R1Q9NYW7 299 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 IL1RAPL1Q9NZN1 696 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 PPARGC1AQ9UBK2 798 aaKnown RBP17.14■□□□□ 0.33
PRDM5-202ENST00000394435 CACNG4Q9UBN1 327 aa17.14■□□□□ 0.33
PRDM5-202ENST00000394435 NPR3P17342 541 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
PRDM5-202ENST00000394435 SLC8A3P57103 927 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 DEUP1Q05D60 604 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 WASHC5Q12768 1159 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 WSCD1Q658N2 575 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 CES3Q6UWW8 571 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 HACE1Q8IYU2 909 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 ZNF567Q8N184 647 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 PGBD4Q96DM1 585 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 PGLYRP2Q96PD5 576 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 SYBUQ9NX95 663 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 RPL26L1Q9UNX3 145 aaKnown RBP17.13■□□□□ 0.33
PRDM5-202ENST00000394435 PSAT1Q9Y617 370 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 TRIP12Q14669 1992 aaPredicted RBP17.13■□□□□ 0.33
PRDM5-202ENST00000394435 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
PRDM5-202ENST00000394435 TPP1O14773 563 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 BIRC5O15392 142 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 SNNO75324 88 aaPredicted RBP17.13■□□□□ 0.33
PRDM5-202ENST00000394435 ALDOAP04075 364 aaKnown RBP17.13■□□□□ 0.33
PRDM5-202ENST00000394435 PGAM1P18669 254 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 CNTFP26441 200 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 GLUD2P49448 558 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 MAP3K7CLP57077 242 aa17.13■□□□□ 0.33
PRDM5-202ENST00000394435 STX3Q13277 289 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms