RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 EPHB2P29323 1055 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 HCAR3P49019 387 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 ZNF135P52742 658 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 AP1B1Q10567 949 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SEMA3BQ13214 749 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 PPP2R5DQ14738 602 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 MORF4L2Q15014 288 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SLC45A4Q5BKX6 768 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 HEATR6Q6AI08 1181 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 HIBCHQ6NVY1 386 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 RHBDF2Q6PJF5 856 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 IQCKQ8N0W5 287 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 CCNYQ8ND76 341 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 OR2W6PQ8NHA6 318 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 ZNF512Q96ME7 567 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 QKIQ96PU8 341 aaKnown RBP eCLIP8.92□□□□□ -0.987e-10■■■■■ 43.3
TDP1-203ENST00000393454 HAPLN3Q96S86 360 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 TXLNGYQ9BZA5 131 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 NACA2Q9H009 215 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 TSPYL1Q9H0U9 437 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 OSBPL2Q9H1P3 480 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 ADAM7Q9H2U9 754 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SEMA4AQ9H3S1 761 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 USP29Q9HBJ7 922 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 MED4Q9NPJ6 270 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 OLA1Q9NTK5 396 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 CLIC5Q9NZA1 410 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 MARCH2Q9P0N8 246 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 ZMYND8Q9ULU4 1186 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 TLR6Q9Y2C9 796 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SLC12A8A0AV02 714 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 HACD1B0YJ81 288 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 GOLGA8MH3BSY2 632 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 DCLK1O15075 740 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 TLL1O43897 1013 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 APOEP02649 317 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SLC2A3P11169 496 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 HTRA4P83105 476 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 IFFO1Q0D2I5 559 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 EIF4EBP2Q13542 120 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 RAB33AQ14088 237 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 PAFAH1B3Q15102 231 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 PDK1Q15118 436 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 CEP85LQ5SZL2 805 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 RNASEH2BQ5TBB1 312 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 DENND2CQ68D51 928 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 MSANTD2Q6P1R3 559 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 PPIL6Q8IXY8 311 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 KLHL23Q8NBE8 558 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 UHMK1Q8TAS1 419 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 FCRL2Q96LA5 508 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 LGMNQ99538 433 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 FERMT1Q9BQL6 677 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 UBE2OQ9C0C9 1292 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 PABPC3Q9H361 631 aaKnown RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 CENPHQ9H3R5 247 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 CCSER2Q9H7U1 834 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SEPT10Q9P0V9 454 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 PAK5Q9P286 719 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 SLC12A6Q9UHW9 1150 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 YIPF1Q9Y548 306 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 COL4A4P53420 1690 aaPredicted RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 GOLGA6L10A6NI86 522 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 PPP1R12AO14974 1030 aaPredicted RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 TLR5O60602 858 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 CXCL14O95715 111 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 SPATA31D3P0C874 917 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 CSH1P0DML2 217 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 CSH2P0DML3 217 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 ATP2A2P16615 1042 aaKnown RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 TWF1Q12792 350 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 PLD1Q13393 1074 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 VEPH1Q14D04 833 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 CEP128Q6ZU80 1094 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 SPATA31D4Q6ZUB0 917 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 TMC7Q7Z402 723 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 HERC6Q8IVU3 1022 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 ZCCHC9Q8N567 271 aaKnown RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 ATP6V0D2Q8N8Y2 350 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 CCDC110Q8TBZ0 833 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 HTR3CQ8WXA8 447 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 CPT1BQ92523 772 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 OLFM3Q96PB7 478 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 RAD9AQ99638 391 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 LBHD1Q9BQE6 289 aaPredicted RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 TTLL2Q9BWV7 592 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.91□□□□□ -0.98
TDP1-203ENST00000393454 TMEM51Q9NW97 253 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 HSFX1Q9UBD0 423 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 STK39Q9UEW8 545 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 XPO7Q9UIA9 1087 aaKnown RBP8.91□□□□□ -0.98
TDP1-203ENST00000393454 NR2E3Q9Y5X4 410 aa8.91□□□□□ -0.98
TDP1-203ENST00000393454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 KCNU1A8MYU2 1149 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 TEX28O15482 410 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 ACSL3O95573 720 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SERPINB6P35237 376 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms