RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TSPY1Q01534 308 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 SLC25A11Q02978 314 aaKnown RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 ARHGAP1Q07960 439 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 RASA2Q15283 850 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 ABI1Q8IZP0 508 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 GBA2Q9HCG7 927 aaPredicted RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 DDX18Q9NVP1 670 aaKnown RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 CACNG4Q9UBN1 327 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 SLC39A10Q9ULF5 831 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 PAPSS1O43252 624 aaPredicted RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 POMCP01189 267 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 GSTA2P09210 222 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 GRM5P41594 1212 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 CLDN10P78369 228 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 LACTB2Q53H82 288 aaPredicted RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 SLC45A4Q5BKX6 768 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 CDCA2Q69YH5 1023 aaPredicted RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 OLFML1Q6UWY5 402 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 L3MBTL3Q96JM7 780 aaPredicted RBP10.84□□□□□ -0.67
CALD1-203ENST00000393118 ULBP1Q9BZM6 244 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 NUDT5Q9UKK9 219 aa10.84□□□□□ -0.67
CALD1-203ENST00000393118 CHADO15335 359 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 CRCPO75575 148 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 USP17L7P0C7H9 530 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 PSMB4P28070 264 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 ZNF132P52740 706 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 ITPRIPL1Q6GPH6 555 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 DRICH1Q6PGQ1 229 aaPredicted RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 OLIG1Q8TAK6 271 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 SGF29Q96ES7 293 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 TRIM56Q9BRZ2 755 aaKnown RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 PDP2Q9P2J9 529 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 FCHO1O14526 889 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 PMPCBO75439 489 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 GPC4O75487 556 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 ASMTLO95671 621 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 ERVK-10P10266 1014 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 CALB2P22676 271 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 GLRBP48167 497 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 CPT1AP50416 773 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 SNX30Q5VWJ9 437 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 NANOGNBQ7Z5D8 188 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 ANKRD52Q8NB46 1076 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 OR6P1Q8NGX9 317 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 RFWD2Q8NHY2 731 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 PCDH19Q8TAB3 1148 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 PRDM12Q9H4Q4 367 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 RNPEPL1Q9HAU8 725 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 EFR3BQ9Y2G0 817 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 DNAJC16Q9Y2G8 782 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 MYH9P35579 1960 aaKnown RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 HMBSP08397 361 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 LINGO3P0C6S8 592 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 SMPD1P17405 629 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 FDFT1P37268 417 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 GPX6P59796 221 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 USP10Q14694 798 aaKnown RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 FASTKD1Q53R41 847 aaKnown RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
CALD1-203ENST00000393118 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 TTC30AQ86WT1 665 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 NT5DC4Q86YG4 428 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 THEM5Q8N1Q8 247 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 LPPQ93052 612 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 SYT15Q9BQS2 421 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 TBC1D10AQ9BXI6 508 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 NDE1Q9NXR1 346 aa10.83□□□□□ -0.68
CALD1-203ENST00000393118 IGKV6D-21A0A0A0MT36 114 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 C3orf70A6NLC5 250 aaPredicted RBP10.82□□□□□ -0.68
CALD1-203ENST00000393118 CASQ2O14958 399 aaPredicted RBP10.82□□□□□ -0.68
CALD1-203ENST00000393118 ENTPD5O75356 428 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 THP07101 528 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 MMP3P08254 477 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 AVPR1AP37288 418 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 KCTD21Q4G0X4 260 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 C9orf57Q5W0N0 161 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 B3GALNT2Q8NCR0 500 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 GABPB2Q8TAK5 448 aaPredicted RBP10.82□□□□□ -0.68
CALD1-203ENST00000393118 SLC26A7Q8TE54 656 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 MCRS1Q96EZ8 462 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 PEBP4Q96S96 227 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 GTSE1Q9NYZ3 720 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 LY75O60449 1722 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 SMIM28A0A1B0GU29 152 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 THPOP40225 353 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 PTDSS1P48651 473 aaKnown RBP10.82□□□□□ -0.68
CALD1-203ENST00000393118 TMED10P49755 219 aaKnown RBP10.82□□□□□ -0.68
CALD1-203ENST00000393118 ATXN3P54252 364 aaPredicted RBP10.82□□□□□ -0.68
CALD1-203ENST00000393118 BST1Q10588 318 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 MMEL1Q495T6 779 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 STRA8Q7Z7C7 330 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 NIPA2Q8N8Q9 360 aa10.82□□□□□ -0.68
CALD1-203ENST00000393118 NAT8LQ8N9F0 302 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms