RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 DUSP16Q9BY84 665 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.383e-6■■■■■ 137.9
RFC5-201ENST00000392542 F5H423 210 aaPredicted RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 RNF103O00237 685 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 GYG2O15488 501 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 NOS2P35228 1153 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 GTF2A2P52657 109 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 SNX17Q15036 470 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 DBN1Q16643 649 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 CASC4Q6P4E1 433 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 RFWD3Q6PCD5 774 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 RINLQ6ZS11 566 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 BNIPLQ7Z465 357 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 CRLF3Q8IUI8 442 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 TMEM40Q8WWA1 233 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 DNAJB3Q8WWF6 145 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 NPY6RQ99463 290 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 FERMT1Q9BQL6 677 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 NMUR2Q9GZQ4 415 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 ENTPD5O75356 428 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 PGAM1P18669 254 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 PITX1P78337 314 aaPredicted RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 AP1B1Q10567 949 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 NAB1Q13506 487 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 HIC1Q14526 733 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 PDK1Q15118 436 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 HSF5Q4G112 596 aaPredicted RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 STXBP5Q5T5C0 1151 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 PACS1Q6VY07 963 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 KYAT3Q6YP21 454 aaKnown RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 CCNJLQ8IV13 435 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 UNC5BQ8IZJ1 945 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 ACMSDQ8TDX5 336 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 CDKL2Q92772 493 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 NT5C3BQ969T7 300 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 WWP1Q9H0M0 922 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 NPR3P17342 541 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 MGAT1P26572 445 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 SESN2P58004 480 aaPredicted RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 LILRA4P59901 499 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 ADAM17P78536 824 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 MFSD10Q14728 455 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 ARNTL2Q8WYA1 636 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 KCTD13Q8WZ19 329 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 DCLRE1BQ9H816 532 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 ZNF395Q9H8N7 513 aaPredicted RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 XPNPEP3Q9NQH7 507 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 TMPRSS4Q9NRS4 437 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 TAS2R1Q9NYW7 299 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 STAP1Q9ULZ2 295 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 HBS1LQ9Y450 684 aaKnown RBP12.67□□□□□ -0.38
RFC5-201ENST00000392542 TSC2P49815 1807 aa12.67□□□□□ -0.38
RFC5-201ENST00000392542 TRIP12Q14669 1992 aaPredicted RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CLDN5O00501 218 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 PPP1R12AO14974 1030 aaPredicted RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 TOP3BO95985 862 aaKnown RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 ATP5BP06576 529 aaKnown RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 PSMB4P28070 264 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CRADDP78560 199 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 STX3Q13277 289 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CRYMQ14894 314 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CFAP61Q8NHU2 1237 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 MCUR1Q96AQ8 359 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 SLC2A13Q96QE2 648 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 NAT9Q9BTE0 207 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 MMADHCQ9H3L0 296 aaPredicted RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 SEPT10Q9P0V9 454 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 ARMCX1Q9P291 453 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 SLC17A6Q9P2U8 582 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 IPPQ9Y573 584 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CAPN14A8MX76 684 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 H0Y3Z8 333 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 M0QYT0 321 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CREB3O43889 395 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 GLRA3O75311 464 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 RARBP10826 455 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 AQP5P55064 265 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 DEUP1Q05D60 604 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 DPYSQ14117 519 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 TAF11Q15544 211 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 DSTYKQ6XUX3 929 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 ZNF567Q8N184 647 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms