RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 E5RJQ4 531 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 CLDN5O00501 218 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 ATP5HO75947 161 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 WARSP23381 471 aaKnown RBP19.6■□□□□ 0.73
CCDC50-202ENST00000392456 ACADVLP49748 655 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 EIF3BP55884 814 aaKnown RBP19.6■□□□□ 0.73
CCDC50-202ENST00000392456 SPIDRQ14159 915 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 SMYD5Q6GMV2 418 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 KLHL35Q6PF15 583 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 FAM47EQ6ZV65 393 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 ADAT2Q7Z6V5 191 aaKnown RBP19.6■□□□□ 0.73
CCDC50-202ENST00000392456 EMC1Q8N766 993 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 INPP5DQ92835 1189 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 DRC3Q9H069 523 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 MRPL46Q9H2W6 279 aaKnown RBP19.6■□□□□ 0.73
CCDC50-202ENST00000392456 ATAD3AQ9NVI7 634 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 HCSTQ9UBK5 93 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 PRELID1Q9Y255 219 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 USTQ9Y2C2 406 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 F8VP50 259 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 PDE5AO76074 875 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 PROSCO94903 275 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 EOMESO95936 686 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 RPL9P32969 192 aaKnown RBP19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TAS2R40P59535 323 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TUSC3Q13454 348 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 ITGA9Q13797 1035 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 DSTYKQ6XUX3 929 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 DEFB128Q7Z7B8 93 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 B3GALNT2Q8NCR0 500 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 SLC35F5Q8WV83 523 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 EPB41L1Q9H4G0 881 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 UBN1Q9NPG3 1134 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TIMMDC1Q9NPL8 285 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 FGFR1OP2Q9NVK5 253 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 CARD8Q9Y2G2 431 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TSC22D4Q9Y3Q8 395 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 SCINQ9Y6U3 715 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TDRD15B5MCY1 1934 aaKnown RBP19.59■□□□□ 0.73
CCDC50-202ENST00000392456 SMIM31A0A1B0GVY4 71 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 CCDC162PA2VCL2 907 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 OXSR1O95747 527 aaPredicted RBP19.59■□□□□ 0.73
CCDC50-202ENST00000392456 COL6A1P12109 1028 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 IFNAR2P48551 515 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 RABGGTBP53611 331 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 AP1B1Q10567 949 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TAF5Q15542 800 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 FBXO46Q6PJ61 603 aaPredicted RBP19.59■□□□□ 0.73
CCDC50-202ENST00000392456 GLB1LQ6UWU2 654 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 Q6ZNX1 250 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 PAQR9Q6ZVX9 377 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 TMC3Q7Z5M5 1100 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 B3GNT5Q9BYG0 378 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 DKK3Q9UBP4 350 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 DNAJB4Q9UDY4 337 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 PCDHA3Q9Y5H8 950 aa19.59■□□□□ 0.73
CCDC50-202ENST00000392456 RELAQ04206 551 aa19.58■□□□□ 0.73
CCDC50-202ENST00000392456 MGAT5Q09328 741 aa19.58■□□□□ 0.73
CCDC50-202ENST00000392456 ARHGAP17Q68EM7 881 aa19.58■□□□□ 0.73
CCDC50-202ENST00000392456 DCUN1D2Q6PH85 259 aa19.58■□□□□ 0.73
CCDC50-202ENST00000392456 ST13P4Q8IZP2 240 aaPredicted RBP19.58■□□□□ 0.73
CCDC50-202ENST00000392456 RASGEF1CQ8N431 466 aa19.58■□□□□ 0.73
CCDC50-202ENST00000392456 ZNF184Q99676 751 aaPredicted RBP19.58■□□□□ 0.73
CCDC50-202ENST00000392456 MAK16Q9BXY0 300 aaKnown RBP19.58■□□□□ 0.73
CCDC50-202ENST00000392456 SEZ6LQ9BYH1 1024 aa19.58■□□□□ 0.73
CCDC50-202ENST00000392456 CES2O00748 559 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 BEST1O76090 585 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 FGGP02679 453 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 GABRB2P47870 512 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 ATP13A4Q4VNC1 1196 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 RNF43Q68DV7 783 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 PPP1R2P3Q6NXS1 205 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 SCUBE3Q8IX30 993 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 KBTBD2Q8IY47 623 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 ACTRT1Q8TDG2 376 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 VWCEQ96DN2 955 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 RTP3Q9BQQ7 232 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 FTHL17Q9BXU8 183 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 CRTAC1Q9NQ79 661 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 TBC1D13Q9NVG8 400 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 ATP11BQ9Y2G3 1177 aa19.58■□□□□ 0.72
CCDC50-202ENST00000392456 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 MYBPHLA2RUH7 354 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 INPPL1O15357 1258 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 KDM1AO60341 852 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 GRAP2O75791 330 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 KRT3P12035 628 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 PTPN1P18031 435 aaKnown RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 TBL3Q12788 808 aaKnown RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 NOMO2Q5JPE7 1267 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 ZDHHC14Q8IZN3 488 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 GFM2Q969S9 779 aaKnown RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 HSPBAP1Q96EW2 488 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 PGM2Q96G03 612 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 PAWRQ96IZ0 340 aaKnown RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 CCT7Q99832 543 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 TBC1D10AQ9BXI6 508 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 GBA3Q9H227 469 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 METTL5Q9NRN9 209 aaKnown RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 MIF4GDA9UHW6 222 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms