RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 DCAF6Q58WW2 860 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 ZC3H12AQ5D1E8 599 aaKnown RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 OTUD1Q5VV17 481 aaPredicted RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 RFWD3Q6PCD5 774 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 PRR23BQ6ZRT6 265 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 ANKS1BQ7Z6G8 1248 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 DEFB106AQ8N104 65 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 ANKRD20A12PQ8NF67 263 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 WFDC5Q8TCV5 224 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 NAT10Q9H0A0 1025 aaKnown RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 DUSP15Q9H1R2 295 aaPredicted RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 NLRC4Q9NPP4 1024 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 ELOVL2Q9NXB9 296 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 NCDNQ9UBB6 729 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 XPO7Q9UIA9 1087 aaKnown RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 RAB23Q9ULC3 237 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 CEP83Q9Y592 693 aa11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 ASCC3Q8N3C0 2202 aaKnown RBP11.83□□□□□ -0.52
IGHV4-28-201ENST00000390612 PCNX2A6NKB5 2137 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 WASH3PC4AMC7 463 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CAPN9O14815 690 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 DCLK1O15075 740 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 TEX33O43247 280 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 DAB1O75553 588 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 ALDH1A2O94788 518 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 GFPT2O94808 682 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 HOXB2P14652 356 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 GABRG2P18507 467 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 NOS2P35228 1153 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 P2RY2P41231 377 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 ZNF165P49910 485 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CDK17Q00537 523 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CDR2Q01850 454 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 UBXN1Q04323 297 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 EIF4HQ15056 248 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 LPAL2Q16609 132 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 MS4A13Q5J8X5 152 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 TAF3Q5VWG9 929 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 KIAA1211LQ6NV74 962 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CEP68Q76N32 757 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 ARCQ7LC44 396 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 BNIPLQ7Z465 357 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 ADIPOR2Q86V24 386 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 XYLT1Q86Y38 959 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 GPR161Q8N6U8 529 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 WFIKKN2Q8TEU8 576 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 SLC20A1Q8WUM9 679 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 C18orf8Q96DM3 657 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 BTN2A3PQ96KV6 586 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 PRICKLE1Q96MT3 831 aaPredicted RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 NPY6RQ99463 290 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 PRMT1Q99873 361 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 DDX50Q9BQ39 737 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 NUCKS1Q9H1E3 243 aaKnown RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 POLMQ9NP87 494 aaPredicted RBP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 RRN3Q9NYV6 651 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CALCOCO1Q9P1Z2 691 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 CABIN1Q9Y6J0 2220 aa11.82□□□□□ -0.52
IGHV4-28-201ENST00000390612 NYNRINQ9P2P1 1898 aaKnown RBP11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 SMTNL1A8MU46 457 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 TBL1XO60907 577 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 GRAP2O75791 330 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 EPN2O95208 641 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 UNGP13051 313 aaPredicted RBP11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 STAT1P42224 750 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 MATKP42679 507 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 WASP42768 502 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 RPS24P62847 133 aaKnown RBP11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 PTP4A2Q12974 167 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 USP39Q53GS9 565 aaKnown RBP11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 ARTNQ5T4W7 220 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 ERICH1Q86X53 443 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 KIAA2013Q8IYS2 634 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 CHPFQ8IZ52 775 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 HJURPQ8NCD3 748 aaPredicted RBP11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 NEK11Q8NG66 645 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 FIBINQ8TAL6 211 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 PGAP3Q96FM1 320 aaPredicted RBP11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 TPSD1Q9BZJ3 242 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 CACNA2D2Q9NY47 1150 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 TMEM59LQ9UK28 342 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 GMEB2Q9UKD1 530 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 STON1Q9Y6Q2 735 aa11.81□□□□□ -0.52
IGHV4-28-201ENST00000390612 A0A1B0GTH6 734 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TCRBV21S2A2A0A5A6 115 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 I6L893 689 aaPredicted RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 APOEP02649 317 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 SLC2A3P11169 496 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 PABPC1P11940 636 aaKnown RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TFE3P19532 575 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms