RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 WDR55Q9H6Y2 383 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 BCL9LQ86UU0 1499 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 NR5A2O00482 541 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 JCHAINP01591 159 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 PYGLP06737 847 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 PLK1P53350 603 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 NR1H2P55055 460 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TMTC4Q5T4D3 741 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TWF2Q6IBS0 349 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 NAPEPLDQ6IQ20 393 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 AMIGO2Q86SJ2 522 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 SPATA16Q9BXB7 569 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CDH22Q9UJ99 828 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 LRCH4O75427 683 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CAPRIN1Q14444 709 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TXNRD3NBQ6F5E7 133 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 UNC5AQ6ZN44 842 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 C7orf43Q8WVR3 580 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 DCUN1D1Q96GG9 259 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CEP19Q96LK0 163 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TMEM165Q9HC07 324 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 PRMT7Q9NVM4 692 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CPSF3Q9UKF6 684 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 IGKV6D-41A0A0C4DH26 115 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 C16orf96A6NNT2 1141 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 SIN3BO75182 1162 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TSHRP16473 764 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 PGAM1P18669 254 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 NFKBIAP25963 317 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 OTUD3Q5T2D3 398 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 GPAMQ9HCL2 828 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CLOCKO15516 846 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 MAN1A2O60476 641 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 LAMTOR4Q0VGL1 99 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 METTL23Q86XA0 190 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 PLEKHO2Q8TD55 490 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 SLC7A6OSQ96CW6 309 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 IFT43Q96FT9 208 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 DDX28Q9NUL7 540 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 UBIAD1Q9Y5Z9 338 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 BAZ2AQ9UIF9 1905 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 TCRBV7S3A2A0A539 114 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 DEAF1O75398 565 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 DDHD2O94830 711 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 ABL2P42684 1182 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 TRPC1P48995 793 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 ACTR3P61158 418 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 DAB2P98082 770 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 TTLL4Q14679 1199 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 TAF5Q15542 800 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 EGFL6Q8IUX8 553 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 ATPAF2Q8N5M1 289 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 LZICQ8WZA0 190 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 CPB2Q96IY4 423 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 MAGEB5Q9BZ81 275 aa13.46□□□□□ -0.25
TRAPPC9-201ENST00000389328 SLCO1B7G3V0H7 640 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 MAP3K13O43283 966 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 ITGA2BP08514 1039 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 NCAM1P13591 858 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 NUMBP49757 651 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 ARHGDIAP52565 204 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 RBBP7Q16576 425 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 FAM43BQ6ZT52 329 aaPredicted RBP13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 SCN4BQ8IWT1 228 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 MYPNQ86TC9 1320 aa13.46□□□□□ -0.26
TRAPPC9-201ENST00000389328 BIRC5O15392 142 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 H2AFYO75367 372 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 MYL4P12829 197 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 HMOX2P30519 316 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 HADHAP40939 763 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 GABRB2P47870 512 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 POU6F1Q14863 301 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 DACT2Q5SW24 774 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 GRTP1Q5TC63 336 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 ZNF555Q8NEP9 628 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 TRAPPC12Q8WVT3 735 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 CD101Q93033 1021 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 APBA2Q99767 749 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 SNRNP25Q9BV90 132 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 SLC4A5Q9BY07 1137 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 DDIT4Q9NX09 232 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 NSMCE4AQ9NXX6 385 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 ADGRA2Q96PE1 1338 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 MRASO14807 208 aa13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-201ENST00000389328 PTPN7P35236 360 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms