RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SLC16A5O15375 505 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 KCNQ3O43525 872 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 RGS14O43566 566 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SPRY3O43610 288 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 LIASO43766 372 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 MARCH6O60337 910 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 LMX1BO60663 402 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 KRT36O76013 467 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 WDR47O94967 919 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 PAK4O96013 591 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 KLKB1P03952 638 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 LCATP04180 440 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 WNT1P04628 370 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SNRNP70P08621 437 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 F7P08709 466 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 MYBP10242 640 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ARSBP15848 533 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 GM2AP17900 193 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 NCLP19338 710 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 BTF3P20290 206 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 CDK11BP21127 795 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DRD1P21728 446 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 AKAP5P24588 427 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ITGB8P26012 769 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 HTR1BP28222 390 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 NDUFS1P28331 727 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DUSP1P28562 367 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 RBL1P28749 1068 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SLC7A1P30825 629 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 IGHMBP2P38935 993 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 PBX1P40424 430 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 STAT6P42226 847 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 VEGFCP49767 419 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 AGTR2P50052 363 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 CPT1AP50416 773 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF84P51523 738 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 CRIP2P52943 208 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 COPAP53621 1224 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 PMS2P54278 862 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SUMO3P55854 103 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SEC61A1P61619 476 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DSC1Q08554 894 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 GRSF1Q12849 480 aaKnown RBP eCLIP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 TRAF2Q12933 501 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 BFSP2Q13515 415 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 RBM39Q14498 530 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF267Q14586 743 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 PLCB4Q15147 1175 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZRSR1Q15695 479 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ELF2Q15723 593 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 KIF19Q2TAC6 998 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 AASDHQ4L235 1098 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 GLE1Q53GS7 698 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 FSCBQ5H9T9 825 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 C3orf38Q5JPI3 329 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 EEF1AKMT2Q5JPI9 291 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DNTTIP2Q5QJE6 756 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ATAT1Q5SQI0 421 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 TTC39AQ5SRH9 613 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 IFIT1BQ5T764 474 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 MANEALQ5VSG8 457 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DCAF12L2Q5VW00 463 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ISM2Q6H9L7 571 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SDE2Q6IQ49 451 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 GIMAP6Q6P9H5 292 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 KYAT3Q6YP21 454 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 CYB5R4Q7L1T6 521 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 MICU3Q86XE3 530 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 FAM217AQ8IXS0 508 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DDIASQ8IXT1 998 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 FAM47BQ8NA70 645 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 CLEC18CQ8NCF0 446 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF485Q8NCK3 441 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 GABPB2Q8TAK5 448 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ADAMTS14Q8WXS8 1223 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 TAF15Q92804 592 aaKnown RBP eCLIP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 HPS3Q969F9 1004 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF419Q96HQ0 510 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 HES6Q96HZ4 224 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF668Q96K58 619 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 POLDIP3Q9BY77 421 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DPH1Q9BZG8 443 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 DDX31Q9H8H2 851 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 MAP6D1Q9H9H5 199 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 ZMAT3Q9HA38 289 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 KRCC1Q9NPI7 259 aaPredicted RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SCRT2Q9NQ03 307 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 TBC1D23Q9NUY8 699 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 OCIAD1Q9NX40 245 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 COL20A1Q9P218 1284 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 IGSF9Q9P2J2 1179 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 TBC1D14Q9P2M4 693 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 CPNE7Q9UBL6 633 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 IP6K2Q9UHH9 426 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 MID2Q9UJV3 735 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 HPSEQ9Y251 543 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 TMA7Q9Y2S6 64 aaKnown RBP0.66□□□□□ -2.3
SNORD28-201ENST00000384706 PCDHAC2Q9Y5I4 1007 aa0.66□□□□□ -2.3
SNORD28-201ENST00000384706 SPATA31A5Q5VU36 1347 aa0.65□□□□□ -2.3
SNORD28-201ENST00000384706 SPATA31A7Q8IWB4 1347 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms