RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 MEX3CQ5U5Q3 659 aaKnown RBP3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 MIS18BP1Q6P0N0 1132 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 CCDC174Q6PII3 467 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 KYAT3Q6YP21 454 aaKnown RBP3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 GALNT15Q8N3T1 639 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 OSR1Q8TAX0 266 aaPredicted RBP3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 STT3BQ8TCJ2 826 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 HMGB4Q8WW32 186 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 ASB12Q8WXK4 309 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 NPIPB3Q92617 1050 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 DPF1Q92782 380 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 DDX23Q9BUQ8 820 aaKnown RBP3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 MYLK2Q9H1R3 596 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 MAGEH1Q9H213 219 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 PABPC3Q9H361 631 aaKnown RBP3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 SFXN1Q9H9B4 322 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 SAYSD1Q9NPB0 183 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 PRDM8Q9NQV8 689 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 BAG5Q9UL15 447 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 VPS4AQ9UN37 437 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 SCAF8Q9UPN6 1271 aaKnown RBP3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 PCDHB2Q9Y5E7 798 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 WDR17Q8IZU2 1322 aa3.15□□□□□ -1.91
RNU6-48P-201ENST00000384161 CYP3A7-CYP3A51PA0A087WV96 503 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3DA0A087WVF3 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3IA0A087WXS9 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3EA0A087X179 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 CYP2D7A0A087X1C5 515 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3KA0A087X1G2 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3BA6NDS4 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 FAM90A18PA6NE21 464 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3FA6NER0 549 aaPredicted RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 FAM90A16PA6NEW6 464 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 WIPF3A6NGB9 483 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 FAM90A9PA6NNJ1 464 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 FAM90A5PA8MXJ8 464 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3LB9A6J9 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 M0QZQ0 153 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TRIM38O00635 465 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TPD52L2O43399 206 aaKnown RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ALDOAP04075 364 aaKnown RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 CELA2AP08217 269 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 FAM90A15PP0C7V4 464 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 FAM90A14PP0C7W9 464 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3HP0C7X1 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 CYP3A7P24462 503 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 CST5P28325 142 aaPredicted RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 NDUFS1P28331 727 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 GRK5P34947 590 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 PCP4P48539 62 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TRAPPC10P48553 1259 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 VPS41P49754 854 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ZNF84P51523 738 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 SRSF4Q08170 494 aaKnown RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 SF3A3Q12874 501 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 PRKG1Q13976 671 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ZNF268Q14587 947 aaPredicted RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 RPS6KA2Q15349 733 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ANKRD40Q6AI12 368 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3GQ6DHY5 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3CQ6IPX1 549 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ERAP2Q6P179 960 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 SLC39A5Q6ZMH5 540 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ZNF782Q6ZMW2 699 aaPredicted RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 NEK8Q86SG6 692 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 SMC5Q8IY18 1101 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 SRRM1Q8IYB3 904 aaKnown RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TBC1D3Q8IZP1 549 aaPredicted RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 NKAPQ8N5F7 415 aaKnown RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 MYCT1Q8N699 235 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 OR6Y1Q8NGX8 325 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 RUBCNQ92622 972 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 KAT2BQ92831 832 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 C5orf34Q96MH7 638 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 NPAS1Q99742 590 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ISCA1Q9BUE6 129 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 EFHD1Q9BUP0 239 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 TMEM120AQ9BXJ8 343 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 BRD8Q9H0E9 1235 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 VPS16Q9H269 839 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ELAC1Q9H777 363 aaKnown RBP3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 PRDM16Q9HAZ2 1276 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 PTPRHQ9HD43 1115 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 NRIP3Q9NQ35 241 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 ASNSD1Q9NWL6 643 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 EMSYQ7Z589 1322 aa3.14□□□□□ -1.91
RNU6-48P-201ENST00000384161 SLC38A8A6NNN8 435 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 KIF28PB7ZC32 967 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 PRYO14603 147 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 INPPL1O15357 1258 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 IRAK2O43187 625 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 HNRNPRO43390 633 aaKnown RBP3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 PPP6R2O75170 966 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 IGFBP2P18065 325 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 TFEBP19484 476 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 AGTR2P50052 363 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 SLC12A2P55011 1212 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 ARL4CP56559 192 aa3.13□□□□□ -1.91
RNU6-48P-201ENST00000384161 RPL15P61313 204 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms