RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 SMYD4Q8IYR2 804 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 KATNAL2Q8IYT4 538 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PPM1NQ8N819 430 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 SETD9Q8NE22 299 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 RASGRP4Q8TDF6 673 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 LENG1Q96BZ8 264 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 CNBD2Q96M20 576 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 TMEM134Q9H6X4 195 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CHST12Q9NRB3 414 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 DNPEPQ9ULA0 475 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PHTF1Q9UMS5 762 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 MTCH2Q9Y6C9 303 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CD52P31358 61 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PEX5P50542 639 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CDH6P55285 790 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PSMD6Q15008 389 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.69□□□□□ -1.5
GEN1-202ENST00000381254 AGAP9Q5VTM2 703 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 SWSAP1Q6NVH7 229 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ZC3H18Q86VM9 953 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 CCDC33Q8N5R6 958 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 OXER1Q8TDS5 423 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 VPS33AQ96AX1 596 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ULK4Q96C45 1275 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ZIM3Q96PE6 472 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 OSBPL10Q9BXB5 764 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PLEKHA4Q9H4M7 779 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CNTNAP2Q9UHC6 1331 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 hCG_1642624A0A1W2PR95 340 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 TMEM120BA0PK00 339 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 FAM170BA6NMN3 283 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 BIRC5O15392 142 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 NQO1P15559 274 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 CHN1P15882 459 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PTPN2P17706 415 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 RENBPP51606 427 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CASP7P55210 303 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PRAMEP78395 509 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CACNB1Q02641 598 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 CREB5Q02930 508 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 NCOA4Q13772 614 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ANGPT1Q15389 498 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 RSPO4Q2I0M5 234 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 TRIM68Q6AZZ1 485 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 GRAMD1CQ8IYS0 662 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 FNIP1Q8TF40 1166 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 MAML1Q92585 1016 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CEP19Q96LK0 163 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 AP1M1Q9BXS5 423 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 MANSC1Q9H8J5 431 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 DNAJB4Q9UDY4 337 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 TAGLN3Q9UI15 199 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 UBR3Q6ZT12 1888 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PNMA8CA0A1B0GUJ8 204 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 SDR42E2A6NKP2 422 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 AP1G2O75843 785 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CYP1A1P04798 512 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 HIST1H2AGP0C0S8 130 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 RALBP11234 206 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PDGFRAP16234 1089 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 HIST1H2ADP20671 130 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 HSD17B3P37058 310 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 MGAT5Q09328 741 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 RRP1BQ14684 758 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 TIMM50Q3ZCQ8 353 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ZNF618Q5T7W0 954 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 TTC19Q6DKK2 380 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 EFCAB12Q6NXP0 572 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CYB5D1Q6P9G0 228 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 LVRNQ6Q4G3 990 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 DDX53Q86TM3 631 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 OR6B3Q8NGW1 331 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 PIGOQ8TEQ8 1089 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 HIST1H2AHQ96KK5 128 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 HIST1H2AJQ99878 128 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 H2AFJQ9BTM1 129 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CXorf56Q9H5V9 222 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 JMJD4Q9H9V9 463 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ZSCAN32Q9NX65 697 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 SYBUQ9NX95 663 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 NCKIPSDQ9NZQ3 722 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 COPG2Q9UBF2 871 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 AMACRQ9UHK6 382 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 APODP05090 189 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 COL6A1P12109 1028 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 MLNP12872 115 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 IL9P15248 144 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 KLRC1P26715 233 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 CSE1LP55060 971 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 RUNX1T1Q06455 604 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 COL9A3Q14050 684 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 CTTNQ14247 550 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 LPAL2Q16609 132 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 INSCQ1MX18 579 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 FAM133BQ5BKY9 247 aaKnown RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 PPP6R3Q5H9R7 873 aaPredicted RBP5.69□□□□□ -1.5
GEN1-202ENST00000381254 ANKRD54Q6NXT1 300 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 LPCAT2Q7L5N7 544 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 ATCAYQ86WG3 371 aa5.69□□□□□ -1.5
GEN1-202ENST00000381254 RASSF3Q86WH2 238 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms