RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LTFP02788 710 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 ACADMP11310 421 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 HOXD9P28356 352 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 ZNF234Q14588 700 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 UAP1L1Q3KQV9 507 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 ISM2Q6H9L7 571 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 PMF1Q6P1K2 205 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 BEND5Q7L4P6 421 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 TMPRSS6Q8IU80 811 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 RGL4Q8IZJ4 473 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 AHI1Q8N157 1196 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 NDRG1Q92597 394 aaKnown RBP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 EDEM1Q92611 657 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 HSPA12BQ96MM6 686 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 PCED1AQ9H1Q7 454 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 USP36Q9P275 1121 aaKnown RBP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
RPAIN-202ENST00000381208 ASCC3Q8N3C0 2202 aaKnown RBP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 WASH3PC4AMC7 463 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 MED7O43513 233 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 OPHN1O60890 802 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 IGLV3-19P01714 112 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 NCAM1P13591 858 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
RPAIN-202ENST00000381208 MAPK8P45983 427 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 TBX4P57082 545 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 SLC14A1Q13336 389 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 ST3GAL2Q16842 350 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 SLC41A1Q8IVJ1 513 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 CCDC117Q8IWD4 279 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-202ENST00000381208 OR2T3Q8NH03 318 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 STK32AQ8WU08 396 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 DNASE2BQ8WZ79 361 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 P2RY11Q96G91 374 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 NUP58Q9BVL2 599 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-202ENST00000381208 CNTN6Q9UQ52 1028 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 CTNND2Q9UQB3 1225 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 CACNA1EQ15878 2313 aa13.52□□□□□ -0.25
RPAIN-202ENST00000381208 MAP1BP46821 2468 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 LAMA1P25391 3075 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 IGLV3-27P01718 113 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 EPHX1P07099 455 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 PABPC1P11940 636 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 BMP6P22004 513 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 BRD2P25440 801 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 HLA-FP30511 346 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 RGS7P49802 495 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 ZBTB16Q05516 673 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 SEMA3BQ13214 749 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 KIAA0907Q7Z7F0 614 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 TOE1Q96GM8 510 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 MED15Q96RN5 788 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 MKRN2Q9H000 416 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 DNAAF2Q9NVR5 837 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 GGA2Q9UJY4 613 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 ATXN2Q99700 1313 aaKnown RBP13.51□□□□□ -0.25
RPAIN-202ENST00000381208 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 CEP295Q9C0D2 2601 aa13.51□□□□□ -0.25
RPAIN-202ENST00000381208 A0A1B0GTW7 788 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 MEI4A8MW99 385 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 RNF225M0QZC1 329 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 MSI1O43347 362 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 ACSL4O60488 711 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 TSPAN3O60637 253 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 DLDP09622 509 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 KRT5P13647 590 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 POLR2EP19388 210 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 TPMTP51580 245 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 SFSWAPQ12872 951 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 CAMK2GQ13555 558 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 PLEKHG6Q3KR16 790 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 FNDC3BQ53EP0 1204 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 PIK3R6Q5UE93 754 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 CHST9Q7L1S5 443 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 PIP4P1Q86T03 277 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 HJURPQ8NCD3 748 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 KAT5Q92993 513 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 GTPBP2Q9BX10 602 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
RPAIN-202ENST00000381208 RWDD2AQ9UIY3 292 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 CLEC4EQ9ULY5 219 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 TLR6Q9Y2C9 796 aa13.5□□□□□ -0.25
RPAIN-202ENST00000381208 H0Y626 953 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 BIN1O00499 593 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 CAPN9O14815 690 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 TRIM16O95361 564 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 ASLP04424 464 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms