RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CFAP57Q96MR6 1250 aa15.36■□□□□ 0.05
VCX3B-201ENST00000381029 FAM204AQ9H8W3 233 aa15.36■□□□□ 0.05
VCX3B-201ENST00000381029 SEPT11Q9NVA2 429 aaKnown RBP15.36■□□□□ 0.05
VCX3B-201ENST00000381029 ADAMTS1Q9UHI8 967 aa15.36■□□□□ 0.05
VCX3B-201ENST00000381029 A0A087X0T9 212 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.35■□□□□ 0.05
VCX3B-201ENST00000381029 RNF40O75150 1001 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 RTN2O75298 545 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 ADCY5O95622 1261 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 FAM228BP0C875 321 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 HOXC13P31276 330 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 CCR1P32246 355 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 SLC11A2P49281 568 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 SULT1E1P49888 294 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 ZNF75DP51815 510 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 RPL7AP62424 266 aaKnown RBP15.35■□□□□ 0.05
VCX3B-201ENST00000381029 OGDHQ02218 1023 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 MAMLD1Q13495 774 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 C5orf22Q49AR2 442 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 MPPE1Q53F39 396 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 MPP7Q5T2T1 576 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 SH3PXD2AQ5TCZ1 1133 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 PPP1R2P3Q6NXS1 205 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 KIAA0907Q7Z7F0 614 aaPredicted RBP15.35■□□□□ 0.05
VCX3B-201ENST00000381029 ZNF683Q8IZ20 524 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 SPEM1Q8N4L4 309 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 OR8K1Q8NGG5 319 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 WFDC5Q8TCV5 224 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 USP33Q8TEY7 942 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 BHMTQ93088 406 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 MRFAP1L1Q96HT8 127 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 ARHGEF4Q9NR80 690 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 DEC1Q9P2X7 70 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 STAP1Q9ULZ2 295 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 STARD13Q9Y3M8 1113 aa15.35■□□□□ 0.05
VCX3B-201ENST00000381029 VPS13AQ96RL7 3174 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TMCO5BA8MYB1 307 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 PRRT4C9JH25 899 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 K7ESF4 209 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TSPAN3O60637 253 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 F9P00740 461 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 APOEP02649 317 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 FTLP02792 175 aaPredicted RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 SLC2A3P11169 496 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 KRT3P12035 628 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 PDGFRAP16234 1089 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 GBP1P32455 592 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TNFRSF4P43489 277 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 KDSRQ06136 332 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 ZNF252P-AS1Q0IIN9 211 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 NME3Q13232 169 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 ANGPT1Q15389 498 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 C15orf59Q2T9L4 293 aaPredicted RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 EMC10Q5UCC4 262 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TMEM215Q68D42 235 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 EXOC4Q96A65 974 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TMA16Q96EY4 203 aaKnown RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 XPO6Q96QU8 1125 aaKnown RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 PRRX2Q99811 253 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 SLC2A11Q9BYW1 496 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TRIM5Q9C035 493 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 TMPRSS4Q9NRS4 437 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 ABHD10Q9NUJ1 306 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 DNAJC17Q9NVM6 304 aaKnown RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 POLR3BQ9NW08 1133 aaPredicted RBP15.34■□□□□ 0.05
VCX3B-201ENST00000381029 HS3ST4Q9Y661 456 aa15.34■□□□□ 0.05
VCX3B-201ENST00000381029 SYNJ2BP-COX16A0A087WUM0 186 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 ATMINO43313 823 aaPredicted RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 PAGE1O75459 146 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 MOCS2O96007 188 aaPredicted RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 APODP05090 189 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 TACR2P21452 398 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 HLA-FP30511 346 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 EIF4A3P38919 411 aaKnown RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 DGKGP49619 791 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 ADKP55263 362 aaKnown RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 HDAC4P56524 1084 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 RPS24P62847 133 aaKnown RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 SATB1Q01826 763 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 GEN1Q17RS7 908 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 TDRD12Q587J7 1177 aaKnown RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 BRMS1LQ5PSV4 323 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 RAP1GAP2Q684P5 730 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 GRAMD4Q6IC98 578 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 STRADAQ7RTN6 431 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 C14orf80Q86SX3 495 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 ATP6V0D2Q8N8Y2 350 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 TC2NQ8N9U0 490 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 DDI1Q8WTU0 396 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 TRIM7Q9C029 511 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 CD248Q9HCU0 757 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 TMEM51Q9NW97 253 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 SPATA6Q9NWH7 488 aaPredicted RBP15.33■□□□□ 0.04
VCX3B-201ENST00000381029 COX16Q9P0S2 106 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 FBXO4Q9UKT5 387 aa15.33■□□□□ 0.04
VCX3B-201ENST00000381029 SSU72P8A0A1W2PR75 194 aa15.32■□□□□ 0.04
VCX3B-201ENST00000381029 ADAM23O75077 832 aa15.32■□□□□ 0.04
VCX3B-201ENST00000381029 HNRNPLP14866 589 aaKnown RBP eCLIP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms