RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 IDUAP35475 653 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 MAPK10P53779 464 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF33BQ06732 778 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 TMEM26Q6ZUK4 368 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 HERC6Q8IVU3 1022 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CARNMT1Q8N4J0 409 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 REXO5Q96IC2 774 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 TMEM246Q9BRR3 403 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 MCMBPQ9BTE3 642 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 LSM14BQ9BX40 385 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 EDEM3Q9BZQ6 932 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ZHX3Q9H4I2 956 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 MAT2BQ9NZL9 334 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ACTR3BQ9P1U1 418 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 FBXO40Q9UH90 709 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 GSTTP1A0A1W2PQM5 241 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 EVPLLA8MZ36 301 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 MIF4GDA9UHW6 222 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 H3BNH8 94 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 POLRMTO00411 1230 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 SNAP91O60641 907 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 SCO1O75880 301 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 S100A6P06703 90 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 TM4SF1P30408 202 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ARHGDIAP52565 204 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 OCA2Q04671 838 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 TCHHL1Q5QJ38 904 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 C6orf10Q5SRN2 563 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 KIAA1841Q6NSI8 718 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ATG14Q6ZNE5 492 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ZC3H7AQ8IWR0 971 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 RTKN2Q8IZC4 609 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ADGRG5Q8IZF4 528 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 AFAP1L2Q8N4X5 818 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 GIMAP8Q8ND71 665 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 JPH3Q8WXH2 748 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CEP19Q96LK0 163 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 NLRP4Q96MN2 994 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 C17orf62Q9BQA9 187 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 C1QTNF7Q9BXJ2 289 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 STN1Q9H668 368 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 AAASQ9NRG9 546 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 DPP7Q9UHL4 492 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 PSMD13Q9UNM6 376 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CLDN25C9JDP6 229 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 I3L4J1 428 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TCEA3O75764 348 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TGM1P22735 817 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ADRA1DP25100 572 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 GABRB3P28472 473 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ETV1P50549 477 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF846Q147U1 533 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 MAPK11Q15759 364 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 LETM2Q2VYF4 491 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ARL6IP4Q66PJ3 421 aaKnown RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 PRR23BQ6ZRT6 265 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SEPT1Q8WYJ6 367 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SNX19Q92543 992 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ACDQ96AP0 544 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TOE1Q96GM8 510 aaKnown RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF560Q96MR9 790 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TRIM15Q9C019 465 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 RAD21L1Q9H4I0 556 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 NTN4Q9HB63 628 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CYP26B1Q9NR63 512 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ADPRHL2Q9NX46 363 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 NINJ2Q9NZG7 142 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 FRMPD4Q14CM0 1322 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ARHGEF37A1IGU5 675 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TRAF5O00463 557 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 GSTM2P28161 218 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 EEF1DP29692 281 aaKnown RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TECP42680 631 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 HCAR3P49019 387 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CHRNDQ07001 517 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SP140Q13342 867 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF568Q3ZCX4 644 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 FAM47CQ5HY64 1035 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 DCAF12L1Q5VU92 463 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TTC27Q6P3X3 843 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 UNC5DQ6UXZ4 953 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 FAM83AQ86UY5 434 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZFPM1Q8IX07 1006 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TTC9Q92623 222 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 MRRFQ96E11 262 aaKnown RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF347Q96SE7 839 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ADAM33Q9BZ11 813 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 KCNK13Q9HB14 408 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CYP4F11Q9HBI6 524 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 POLE4Q9NR33 117 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 EMC3Q9P0I2 261 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 DNMT3BQ9UBC3 853 aaKnown RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CPNE7Q9UBL6 633 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms