RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 GCNT4Q9P109 453 aa8.74□□□□□ -1.01
NHLRC3-201ENST00000379599 NXF1Q9UBU9 619 aaKnown RBP8.74□□□□□ -1.01
NHLRC3-201ENST00000379599 MAU2Q9Y6X3 613 aa8.74□□□□□ -1.01
NHLRC3-201ENST00000379599 ZHX2Q9Y6X8 837 aa8.74□□□□□ -1.01
NHLRC3-201ENST00000379599 ERVH48-1M5A8F1 160 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 RFPL2O75678 378 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 FTLP02792 175 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 TCN1P20061 433 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 PKLRP30613 574 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 ACOT2P49753 483 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 PKNOX1P55347 436 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 C19orf57Q0VDD7 668 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 SNTA1Q13424 505 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 C6orf132Q5T0Z8 1188 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 ZFP1Q6P2D0 407 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 DCUN1D2Q6PH85 259 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 BNC2Q6ZN30 1099 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 ANKRD13DQ6ZTN6 518 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 KCTD8Q6ZWB6 473 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CHST15Q7LFX5 561 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CARM1Q86X55 608 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 FAM109AQ8N4B1 249 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 TP53INP1Q96A56 240 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 TXNDC15Q96J42 360 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 PAFAH2Q99487 392 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 TM9SF2Q99805 663 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 WDR12Q9GZL7 423 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 ZNF221Q9UK13 617 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 NENFQ9UMX5 172 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 POLIQ9UNA4 740 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 EVPLLA8MZ36 301 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 TSPAN4O14817 238 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 XRCC5P13010 732 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 IFI30P13284 250 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 NR2F2P24468 414 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CALML3P27482 149 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 RRM2P31350 389 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 FAM26FQ5R3K3 315 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 FRMD7Q6ZUT3 714 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 SYDE1Q6ZW31 735 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CTAGE3PQ8IX95 158 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 GALNT12Q8IXK2 581 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 PIK3R3Q92569 461 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 LARP4BQ92615 738 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CMTM5Q96DZ9 223 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 DMRTB1Q96MA1 342 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 STRBPQ96SI9 672 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 EPS8L2Q9H6S3 715 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 SYTL2Q9HCH5 934 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 EPB41L4AQ9HCS5 686 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 THG1LQ9NWX6 298 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 MOCS1Q9NZB8 636 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 DNMT3BQ9UBC3 853 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 WARS2Q9UGM6 360 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 FLT4P35916 1363 aa8.73□□□□□ -1.01
NHLRC3-201ENST00000379599 CENPXA8MT69 81 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 FOXN3O00409 490 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 SSTR1P30872 391 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 MAN1A1P33908 653 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 HTR2BP41595 481 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 GPLD1P80108 840 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 FUT2Q10981 343 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 IKBKEQ14164 716 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 POU6F1Q14863 301 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 SLX4IPQ5VYV7 408 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 NSMFQ6X4W1 530 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 ZNF354CQ86Y25 554 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 ZNF34Q8IZ26 560 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 ZCCHC9Q8N567 271 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 KCTD4Q8WVF5 259 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 USP13Q92995 863 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 MTMR9Q96QG7 549 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 CDRT15Q96T59 188 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 SERPINI1Q99574 410 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 SSU72Q9NP77 194 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 ABCB10Q9NRK6 738 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 SIGLEC1Q9BZZ2 1709 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 A0A0B4J203 849 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 PIK3R2O00459 728 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 COPEO14579 308 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 RNASEH2AO75792 299 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 OR52Z1P0C646 297 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 ZNF26P17031 533 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 XRCC1P18887 633 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 IL6STP40189 918 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 CASP3P42574 277 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 SEPHS1P49903 392 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 RHAGQ02094 409 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 GALNT2Q10471 571 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 PAGE2BQ5JRK9 111 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 C11orf63Q6NUN7 778 aa8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 METTL2BQ6P1Q9 378 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 FIP1L1Q6UN15 594 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-201ENST00000379599 ZCCHC23Q6ZST2 131 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms