RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 CCP110O43303 1012 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 MOCS2O96007 188 aaPredicted RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 TFE3P19532 575 aaPredicted RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 PSMA2P25787 234 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 CTHP32929 405 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 GJA4P35212 333 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 MAGEA1P43355 309 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 AIF1P55008 147 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 PIGHQ14442 188 aaPredicted RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 ANO4Q32M45 955 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 MPP7Q5T2T1 576 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TXLNBQ8N3L3 684 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 TTC8Q8TAM2 541 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 FAM3CQ92520 227 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 C1orf74Q96LT6 269 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 XPO6Q96QU8 1125 aaKnown RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 HAPLN3Q96S86 360 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 BBS2Q9BXC9 721 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TKTL2Q9H0I9 626 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 CALCOCO1Q9P1Z2 691 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 IP6K2Q9UHH9 426 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TECTAO75443 2155 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 KANSL1LA0AUZ9 987 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 F5H5T6 163 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 MYO1FO00160 1098 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 STK25O00506 426 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 TYRP14679 529 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 HDAC4P56524 1084 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 KRT83P78385 493 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
PCNA-201ENST00000379143 TTC39BQ5VTQ0 682 aaPredicted RBP12.35□□□□□ -0.43
PCNA-201ENST00000379143 BMP8AQ7Z5Y6 402 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 FAM131BQ86XD5 332 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 TMEM139Q8IV31 216 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 SUGP1Q8IWZ8 645 aaKnown RBP12.35□□□□□ -0.43
PCNA-201ENST00000379143 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
PCNA-201ENST00000379143 DDI1Q8WTU0 396 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 TMA16Q96EY4 203 aaKnown RBP12.35□□□□□ -0.43
PCNA-201ENST00000379143 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 ANAPC7Q9UJX3 599 aa12.35□□□□□ -0.43
PCNA-201ENST00000379143 MYO15AQ9UKN7 3530 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 HAX1O00165 279 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 GFRA2O00451 464 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 TRDMT1O14717 391 aaKnown RBP12.34□□□□□ -0.43
PCNA-201ENST00000379143 NCAM2O15394 837 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 CACNG3O60359 315 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 PAGE1O75459 146 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 PENKP01210 267 aaPredicted RBP12.34□□□□□ -0.43
PCNA-201ENST00000379143 TACR2P21452 398 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 PCK1P35558 622 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 SOX9P48436 509 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
PCNA-201ENST00000379143 VCPP55072 806 aaKnown RBP12.34□□□□□ -0.43
PCNA-201ENST00000379143 OGDHQ02218 1023 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 MS4A13Q5J8X5 152 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 RABGAP1LQ5R372 815 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 SH3PXD2AQ5TCZ1 1133 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 FYB2Q5VWT5 728 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 NADSYN1Q6IA69 706 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 LRRC31Q6UY01 552 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 RAD9BQ6WBX8 426 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 LRRC8AQ8IWT6 810 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 NIPA2Q8N8Q9 360 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 HJURPQ8NCD3 748 aaPredicted RBP12.34□□□□□ -0.43
PCNA-201ENST00000379143 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 CD101Q93033 1021 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 NTAN1Q96AB6 310 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 CALR3Q96L12 384 aaKnown RBP12.34□□□□□ -0.43
PCNA-201ENST00000379143 P2RY13Q9BPV8 354 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 SLC2A11Q9BYW1 496 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 OSBPL6Q9BZF3 934 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 TBC1D17Q9HA65 648 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
PCNA-201ENST00000379143 COL4A3Q01955 1670 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 GOLGA6L7A0A1B0GV03 622 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 MTA2O94776 668 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 DRD1P21728 446 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 SLC6A4P31645 630 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 ADRA1BP35368 520 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 ZNF252P-AS1Q0IIN9 211 aa12.33□□□□□ -0.44
PCNA-201ENST00000379143 SCAPQ12770 1279 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms