RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 FAM159BA6NKW6 160 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 BTBD19C9JJ37 291 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 ICAM1P05362 532 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 KRT19P08727 400 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 PDGFRBP09619 1106 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 SFNP31947 248 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 ABCG1P45844 678 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 PRKCEQ02156 737 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 SLC10A2Q12908 348 aaPredicted RBP16.32■□□□□ 0.2
CKAP4-201ENST00000378026 ITPRIPL1Q6GPH6 555 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 CMC1Q7Z7K0 106 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 NUP93Q8N1F7 819 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 DDI1Q8WTU0 396 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 SDCBP2Q9H190 292 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 XPNPEP3Q9NQH7 507 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 DNAJC28Q9NX36 388 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 SH3GLB1Q9Y371 365 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 LOXHD1Q8IVV2 1947 aa16.32■□□□□ 0.2
CKAP4-201ENST00000378026 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 ZNF195O14628 629 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 THRAP10827 490 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 PSMC3P17980 439 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
CKAP4-201ENST00000378026 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
CKAP4-201ENST00000378026 CDH15P55291 814 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 SESN2P58004 480 aaPredicted RBP16.31■□□□□ 0.2
CKAP4-201ENST00000378026 PPP2R5DQ14738 602 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 TAZQ16635 292 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 FSCBQ5H9T9 825 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 CCDC60Q8IWA6 550 aaPredicted RBP16.31■□□□□ 0.2
CKAP4-201ENST00000378026 DSELQ8IZU8 1212 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 UBR7Q8N806 425 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 NETO2Q8NC67 525 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 EME1Q96AY2 570 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 ADPGKQ9BRR6 497 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 MKS1Q9NXB0 559 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 RIMS3Q9UJD0 308 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 ZNF232Q9UNY5 417 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 DOLKQ9UPQ8 538 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 PCNTO95613 3336 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 GLRA3O75311 464 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 TYK2P29597 1187 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 CAP2P40123 477 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 RPL26P61254 145 aaKnown RBP16.31■□□□□ 0.2
CKAP4-201ENST00000378026 EML3Q32P44 896 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 XYLT1Q86Y38 959 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 PLD5Q8N7P1 536 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 FNDC8Q8TC99 324 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 RCN3Q96D15 328 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 NIF3L1Q9GZT8 377 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 RRN3Q9NYV6 651 aa16.31■□□□□ 0.2
CKAP4-201ENST00000378026 UTRNP46939 3433 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ZNF189O75820 626 aaPredicted RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 RAD17O75943 681 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 EPHA3P29320 983 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 APOFQ13790 326 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ANKDD1AQ495B1 522 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 UBA3Q8TBC4 463 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 TMA16Q96EY4 203 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 RTKNQ9BST9 563 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ZNF518BQ9C0D4 1074 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 P4HA1P13674 534 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 VARSP26640 1264 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 SERPINB9P50453 376 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 NAA20P61599 178 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 NXNQ6DKJ4 435 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 BNC2Q6ZN30 1099 aaPredicted RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ZBTB46Q86UZ6 589 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ZBTB8BQ8NAP8 495 aaPredicted RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ATP6V0A1Q93050 837 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 WRNIP1Q96S55 665 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 SERPINI1Q99574 410 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 NGRNQ9NPE2 291 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 THEGQ9P2T0 379 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 COPG2Q9UBF2 871 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 PIK3R1P27986 724 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 CCR10P46092 362 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 CEACAM7Q14002 265 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 TFDP2Q14188 446 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 ZNF699Q32M78 642 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 DACT2Q5SW24 774 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 CPNE9Q8IYJ1 553 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 PQLC3Q8N755 202 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 KYQ8NBH2 561 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 PIWIL1Q96J94 861 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 RNF157Q96PX1 679 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 PDCD2LQ9BRP1 358 aa16.3■□□□□ 0.2
CKAP4-201ENST00000378026 STN1Q9H668 368 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 PAIP2BQ9ULR5 123 aaKnown RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 MAGED2Q9UNF1 606 aaPredicted RBP16.3■□□□□ 0.2
CKAP4-201ENST00000378026 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms