RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SPATA13Q96N96 652 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SUN2Q9UH99 717 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 WDR27A2RRH5 827 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 H0Y3Z8 333 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 DAB1O75553 588 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 GHRHRQ02643 423 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 TAF5Q15542 800 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 PKN2Q16513 984 aaKnown RBP14.9□□□□□ -0.02
TCOF1-202ENST00000377797 STRADAQ7RTN6 431 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 LMO3Q8TAP4 145 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 CDK5RAP1Q96SZ6 601 aaKnown RBP14.9□□□□□ -0.02
TCOF1-202ENST00000377797 SERPINI1Q99574 410 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 C16orf70Q9BSU1 422 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 NFKBIZQ9BYH8 718 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 HACD3Q9P035 362 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 DNAJC6O75061 913 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 SCNN1BP51168 640 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 NETO2Q8NC67 525 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 LGMNQ99538 433 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 CTNNAL1Q9UBT7 734 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 CYP2C18P33260 490 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 ALDH18A1P54886 795 aaKnown RBP14.9□□□□□ -0.02
TCOF1-202ENST00000377797 ZRANB3Q5FWF4 1079 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 SLC26A9Q7LBE3 791 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 CDC26Q8NHZ8 85 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 VAT1Q99536 393 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 NUF2Q9BZD4 464 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 HIPK3Q9H422 1215 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 Q9Y3F1 56 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 PTPRJQ12913 1337 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 GLRA3O75311 464 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 OR4Q2P0C623 313 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 MYL4P12829 197 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 SELPP16109 830 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 TMEM63BQ5T3F8 832 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 RFX8Q6ZV50 586 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 LGI2Q8N0V4 545 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 NUP93Q8N1F7 819 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 PPWD1Q96BP3 646 aaKnown RBP14.9□□□□□ -0.02
TCOF1-202ENST00000377797 FAM124BQ9H5Z6 455 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-202ENST00000377797 DYRK4Q9NR20 520 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 GTF2IRD1Q9UHL9 959 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 MOSPD1Q9UJG1 213 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 PHTF1Q9UMS5 762 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 EFR3BQ9Y2G0 817 aa14.9□□□□□ -0.02
TCOF1-202ENST00000377797 CCT8L1PA6NM43 557 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 TSPAN3O60637 253 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 INHAP05111 366 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 AVPR1AP37288 418 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 MRNIPQ6NTE8 343 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 YAF2Q8IY57 180 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 IQCKQ8N0W5 287 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 IGF2BP3O00425 579 aaKnown RBP eCLIP14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PSMB4P28070 264 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 CDKN2BP42772 138 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 KDSRQ06136 332 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 POLD3Q15054 466 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PARP6Q2NL67 630 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 TTC27Q6P3X3 843 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 ANKS3Q6ZW76 656 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 ITIH5Q86UX2 942 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PRDM16Q9HAZ2 1276 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PKP3Q9Y446 797 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 MYBPHLA2RUH7 354 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 GPD2P43304 727 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 ACLYP53396 1101 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PTP4A2Q12974 167 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 LATS2Q9NRM7 1088 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 CHADO15335 359 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 AOC2O75106 756 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 PYGLP06737 847 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 SERPINF2P08697 491 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 ATP5C1P36542 298 aaKnown RBP14.89□□□□□ -0.03
TCOF1-202ENST00000377797 SOWAHAQ2M3V2 549 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 KBTBD12Q3ZCT8 623 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 HSP90AA5PQ58FG0 334 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 FAM228AQ86W67 206 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 MAGEB18Q96M61 343 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 ZNF558Q96NG5 402 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 TRIM54Q9BYV2 358 aa14.89□□□□□ -0.03
TCOF1-202ENST00000377797 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-202ENST00000377797 ADRA1BP35368 520 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 LRRC8DQ7L1W4 858 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 DDIASQ8IXT1 998 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 GPR152Q8TDT2 470 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 LRRC39Q96DD0 335 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 DCUN1D1Q96GG9 259 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 ATP13A1Q9HD20 1204 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 MYH11P35749 1972 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 IGKV6D-21A0A0A0MT36 114 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 C2orf81A6NN90 581 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PAPSS1O43252 624 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-202ENST00000377797 CHRM3P20309 590 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PURAQ00577 322 aaKnown RBP14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PTRHD1Q6GMV3 140 aaKnown RBP14.88□□□□□ -0.03
TCOF1-202ENST00000377797 ATAD1Q8NBU5 361 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 HNRNPABQ99729 332 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms