RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 WDR59Q6PJI9 974 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 LRRC55Q6ZSA7 311 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 VPS50Q96JG6 964 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 DACH2Q96NX9 599 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 PORCNQ9H237 461 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 DLGAP2Q9P1A6 1054 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 FKBP6O75344 327 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 CPA3P15088 417 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 TATDN1Q6P1N9 297 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 NLNQ9BYT8 704 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 VPS28Q9UK41 221 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 CNTNAP2Q9UHC6 1331 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 IRF6O14896 467 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 MAP3K6O95382 1288 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 GTF2BQ00403 316 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 MAGEC3Q8TD91 643 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 SEPT3Q9UH03 358 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.25□□□□□ -0.61
MDC1-201ENST00000376406 FAM47E-STBD1D6RA91 191 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 DEAF1O75398 565 aaPredicted RBP11.25□□□□□ -0.61
MDC1-201ENST00000376406 OCM2P0CE71 109 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 OCMP0CE72 109 aaPredicted RBP11.25□□□□□ -0.61
MDC1-201ENST00000376406 TKTL1P51854 596 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 ADRM1Q16186 407 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 VSIG10LQ86VR7 867 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 PLD3Q8IV08 490 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 DNAJC19Q96DA6 116 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 SNTG2Q9NY99 539 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 VPS26AO75436 327 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 CRYMQ14894 314 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 TTMPQ5BVD1 217 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 MREGQ8N565 214 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 FICDQ9BVA6 458 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 FAM124BQ9H5Z6 455 aaPredicted RBP11.25□□□□□ -0.61
MDC1-201ENST00000376406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.25□□□□□ -0.61
MDC1-201ENST00000376406 MYH15Q9Y2K3 1946 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 GIT1Q9Y2X7 761 aa11.25□□□□□ -0.61
MDC1-201ENST00000376406 CASP5P51878 434 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 MPP3Q13368 585 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ZNF446Q9NWS9 450 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 WWOXQ9NZC7 414 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 VTI1BQ9UEU0 232 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 CASTOR2A6NHX0 329 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 MEIS2O14770 477 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ALADP13716 330 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ELK3P41970 407 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 CCDC33Q8N5R6 958 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ECSITQ9BQ95 431 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 BTBD10Q9BSF8 475 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 MMADHCQ9H3L0 296 aaPredicted RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 SOX13Q9UN79 622 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 LAMB4A4D0S4 1761 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 EVPLLA8MZ36 301 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ANKRD63C9JTQ0 380 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SUPT7LO94864 414 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 TBX4P57082 545 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 DLG4P78352 724 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 TRMT5Q32P41 509 aaKnown RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 IFNEQ86WN2 208 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SLC9A9Q8IVB4 645 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 TSEN2Q8NCE0 465 aaKnown RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 SYT17Q9BSW7 474 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ASAH2Q9NR71 780 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 TBC1D23Q9NUY8 699 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 THAP1Q9NVV9 213 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 NCKIPSDQ9NZQ3 722 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 LACTBL1A8MY62 500 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 RHBDL3P58872 404 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 TERB1Q8NA31 727 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 HTR3CQ8WXA8 447 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ADAM2Q99965 735 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 DERAQ9Y315 318 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 KANSL1LA0AUZ9 987 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SLC12A8A0AV02 714 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SRRM3A6NNA2 597 aaPredicted RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 ITGALP20701 1170 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 GRK4P32298 578 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 CAMK2GQ13555 558 aaPredicted RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 HYIQ5T013 277 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 LAYNQ6UX15 382 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 FAM131BQ86XD5 332 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SPATA20Q8TB22 786 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 C18orf25Q96B23 403 aaPredicted RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 CLPBQ9H078 707 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 TRHDEQ9UKU6 1024 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 CITO14578 2027 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 CLUHO75153 1309 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 APOC4-APOC2K7ER74 178 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 ZSCAN9O15535 394 aaPredicted RBP11.24□□□□□ -0.61
MDC1-201ENST00000376406 FKBP9O95302 570 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 APOA1P02647 267 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 APOC2P02655 101 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 NPY2RP49146 381 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 SLC6A3Q01959 620 aa11.24□□□□□ -0.61
MDC1-201ENST00000376406 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms