RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PRKCGP05129 697 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 HARS2P49590 506 aaKnown RBP21.75■■□□□ 1.07
UPF3A-202ENST00000375299 OAZ1P54368 228 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 ZNF280AP59817 542 aaPredicted RBP21.75■■□□□ 1.07
UPF3A-202ENST00000375299 EN1Q05925 392 aaPredicted RBP21.75■■□□□ 1.07
UPF3A-202ENST00000375299 PRKG1Q13976 671 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 CA9Q16790 459 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 CCDC14Q49A88 953 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 ZBTB8OSQ8IWT0 167 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 DCUN1D1Q96GG9 259 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 PCYT2Q99447 389 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 SNRNP25Q9BV90 132 aaKnown RBP21.75■■□□□ 1.07
UPF3A-202ENST00000375299 BTBD7Q9P203 1132 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 PSMD13Q9UNM6 376 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 ZMPSTE24O75844 475 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 SRGAP2CP0DJJ0 459 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 VDRP11473 427 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 ICAM3P32942 547 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 TLR1Q15399 786 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 POTEAQ6S8J7 498 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 MPZL3Q6UWV2 235 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 CDKL2Q92772 493 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 ZNF670Q9BS34 389 aa21.75■■□□□ 1.07
UPF3A-202ENST00000375299 NGRNQ9NPE2 291 aaKnown RBP21.75■■□□□ 1.07
UPF3A-202ENST00000375299 C6orf203Q9P0P8 240 aaPredicted RBP21.75■■□□□ 1.07
UPF3A-202ENST00000375299 WDR27A2RRH5 827 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 STK10O94804 968 aaKnown RBP21.74■■□□□ 1.07
UPF3A-202ENST00000375299 RALBP11234 206 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 RPL5P46777 297 aaKnown RBP21.74■■□□□ 1.07
UPF3A-202ENST00000375299 SEMA5AQ13591 1074 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 TTLL12Q14166 644 aaPredicted RBP21.74■■□□□ 1.07
UPF3A-202ENST00000375299 FSCBQ5H9T9 825 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 DPH6Q7L8W6 267 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 PQLC1Q8N2U9 271 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 CAMKK2Q96RR4 588 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 RTKNQ9BST9 563 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 COPG2Q9UBF2 871 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 DPYSL4O14531 572 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 DCXO43602 365 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 PROZP22891 400 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 INSCQ1MX18 579 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 TMEM130Q8N3G9 435 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 C1orf127Q8N9H9 656 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 TBCBQ99426 244 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 ACAD9Q9H845 621 aa21.74■■□□□ 1.07
UPF3A-202ENST00000375299 NBPF12Q5TAG4 269 aaPredicted RBP21.73■■□□□ 1.07
UPF3A-202ENST00000375299 IER5Q5VY09 327 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 RNF149Q8NC42 400 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 HEXIM2Q96MH2 286 aaKnown RBP21.73■■□□□ 1.07
UPF3A-202ENST00000375299 Q9H521 79 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 TMEM216Q9P0N5 145 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 VILLO15195 856 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 ITGA2BP08514 1039 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 CYP2F1P24903 491 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 PMLP29590 882 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 LAMTOR4Q0VGL1 99 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 KLF10Q13118 480 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 STXBP2Q15833 593 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 CASC4Q6P4E1 433 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 RBM44Q6ZP01 1051 aaKnown RBP21.73■■□□□ 1.07
UPF3A-202ENST00000375299 LENG1Q96BZ8 264 aaPredicted RBP21.73■■□□□ 1.07
UPF3A-202ENST00000375299 ADAMTS5Q9UNA0 930 aa21.73■■□□□ 1.07
UPF3A-202ENST00000375299 MDM4O15151 490 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 ZBTB14O43829 449 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 TMCC1O94876 653 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 CLPTM1O96005 669 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 TFAP2AP05549 437 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 CXCL8P10145 99 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 YY1P25490 414 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 TMEM132BQ14DG7 1078 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 PPP6R3Q5H9R7 873 aaPredicted RBP21.72■■□□□ 1.07
UPF3A-202ENST00000375299 GBA2Q9HCG7 927 aaPredicted RBP21.72■■□□□ 1.07
UPF3A-202ENST00000375299 PTPRHQ9HD43 1115 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 DOCK1Q14185 1865 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 DNAJA2O60884 412 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 NFICP08651 508 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 STAT5BP51692 787 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 GBE1Q04446 702 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 NAB1Q13506 487 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 B3GNT6Q6ZMB0 384 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 TSHZ1Q6ZSZ6 1077 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 ZNF280CQ8ND82 737 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 JDP2Q8WYK2 163 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 RAB26Q9ULW5 256 aa21.72■■□□□ 1.07
UPF3A-202ENST00000375299 FBXO21O94952 628 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 IL18RAPO95256 599 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 ITGB3P05106 788 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 MX2P20592 715 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 CYP3A5P20815 502 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 SLC10A2Q12908 348 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-202ENST00000375299 STILQ15468 1287 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 ATF7IP2Q5U623 682 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 EPGNQ6UW88 154 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 ITFG2Q969R8 447 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 CLMNQ96JQ2 1002 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 QKIQ96PU8 341 aaKnown RBP eCLIP21.71■■□□□ 1.07
UPF3A-202ENST00000375299 RNPEPQ9H4A4 650 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 COG4Q9H9E3 785 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 RPF1Q9H9Y2 349 aaKnown RBP21.71■■□□□ 1.07
UPF3A-202ENST00000375299 CYP3A43Q9HB55 503 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms