RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TCERG1LQ5VWI1 586 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 DBX2Q6ZNG2 339 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 MICU3Q86XE3 530 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CACNA2D3Q8IZS8 1091 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TRPC4APQ8TEL6 797 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 MTFMTQ96DP5 389 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 NGLY1Q96IV0 654 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 SPATA13Q96N96 652 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PINK1Q9BXM7 581 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 FRMD8Q9BZ67 464 aaPredicted RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 ABCG8Q9H221 673 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 OBP2BQ9NPH6 170 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 MBD2Q9UBB5 411 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 MROH5Q6ZUA9 1318 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 GSTTP1A0A1W2PQM5 241 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ZSCAN5BA6NJL1 495 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 H0YIN7 160 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 CYTIPO60759 359 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ANXA6P08133 673 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ANPEPP15144 967 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 LAG3P18627 525 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 EIF2DP41214 584 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 COPB1P53618 953 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 TSTA3Q13630 321 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 HFEQ30201 348 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SEZ6L2Q6UXD5 910 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 TMTC3Q6ZXV5 915 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 C1orf162Q8NEQ5 155 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 OR14C36Q8NHC7 312 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 METTL6Q8TCB7 284 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 GRAMD1AQ96CP6 724 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 TREM1Q9NP99 234 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SCAF8Q9UPN6 1271 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ERICH2A1L162 156 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 PEX1O43933 1283 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 AKR7A3O95154 331 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 KCNK5O95279 499 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SGPL1O95470 568 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 STAT5AP42229 794 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 DNM2P50570 870 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 PRSS12P56730 875 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 PRKCEQ02156 737 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 PRKCZQ05513 592 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 XRCC4Q13426 336 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 AUHQ13825 339 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 SLC35G1Q2M3R5 365 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 TRIM71Q2Q1W2 868 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 COX20Q5RI15 118 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 APOA5Q6Q788 366 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 RDM1Q8NG50 284 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SPPL3Q8TCT6 385 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 AIFM3Q96NN9 605 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SHCBP1LQ9BZQ2 653 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 RIBC2Q9H4K1 309 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ECHDC1Q9NTX5 307 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 RUVBL1Q9Y265 456 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 TSC22D4Q9Y3Q8 395 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 LTBP3Q9NS15 1303 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 TYW5A2RUC4 315 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 POLRMTO00411 1230 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 CRTAPO75718 401 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 PRLP01236 227 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 GSNP06396 782 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 FHP07954 510 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 GLI1P08151 1106 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 CSH1P0DML2 217 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 CSH2P0DML3 217 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 UMPSP11172 480 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ALADP13716 330 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 USH1GQ495M9 461 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SLC9C2Q5TAH2 1124 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 C16orf59Q7L2K0 433 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 OTOAQ7RTW8 1153 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 SZRD1Q7Z422 152 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 NKAIN4Q8IVV8 208 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 MPP5Q8N3R9 675 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 UBLCP1Q8WVY7 318 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 ST8SIA4Q92187 359 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 MUL1Q969V5 352 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 MED30Q96HR3 178 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 CITED2Q99967 270 aaPredicted RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 CNOT6Q9ULM6 557 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 PIN4Q9Y237 131 aaKnown RBP9.31□□□□□ -0.92
UBR4-201ENST00000375218 USP20Q9Y2K6 914 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 GMEB1Q9Y692 573 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 FAM169AQ9Y6X4 670 aa9.31□□□□□ -0.92
UBR4-201ENST00000375218 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 C1orf232A0A0U1RR37 186 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CHRM5P08912 532 aaPredicted RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 ATF6P18850 670 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 SLC9A1P19634 815 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 KCNA3P22001 575 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms