RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 HEBP1Q9NRV9 189 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 ANAPC7Q9UJX3 599 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 FBXL21Q9UKT6 434 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 PIAS3Q9Y6X2 628 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 A0A0A6YYK5 440 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 GOLGA6L7A0A1B0GV03 622 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 BTNL10A8MVZ5 291 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 SPECC1L-ADORA2AF8WAN1 911 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 I6L893 689 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 HOXC11O43248 304 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 PAGE1O75459 146 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 ADH5P11766 374 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 TACR2P21452 398 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 ARHGAP25P42331 645 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 VAV2P52735 878 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 HADHBP55084 474 aaKnown RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 STARD6P59095 220 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 CCZ1BP86790 482 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 CCZ1P86791 482 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 NRG1Q02297 640 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 SCAPQ12770 1279 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 GAB4Q2WGN9 574 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 C5orf22Q49AR2 442 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 MPPE1Q53F39 396 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 MS4A13Q5J8X5 152 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 MPP7Q5T2T1 576 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 PIK3R6Q5UE93 754 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 TXLNBQ8N3L3 684 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 ARFGAP1Q8N6T3 406 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 TMA16Q96EY4 203 aaKnown RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 CALR3Q96L12 384 aaKnown RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 OSBPL2Q9H1P3 480 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 ANLNQ9NQW6 1124 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 ARHGEF3Q9NR81 526 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 XPO7Q9UIA9 1087 aaKnown RBP11.77□□□□□ -0.53
HSPG2-202ENST00000374676 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.53
HSPG2-202ENST00000374676 KRBA1A5PL33 1030 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 SHISA7A6NL88 538 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 TRDMT1O14717 391 aaKnown RBP11.76□□□□□ -0.53
HSPG2-202ENST00000374676 LRCH4O75427 683 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 PROSCO94903 275 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 CYBBP04839 570 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 MIPP30301 263 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 SLC6A4P31645 630 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 CTHP32929 405 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 EIF2DP41214 584 aaKnown RBP11.76□□□□□ -0.53
HSPG2-202ENST00000374676 SOX9P48436 509 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 AUHQ13825 339 aaKnown RBP11.76□□□□□ -0.53
HSPG2-202ENST00000374676 ANO4Q32M45 955 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 FYB2Q5VWT5 728 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 RAP1GAP2Q684P5 730 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 RNF43Q68DV7 783 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 RFWD3Q6PCD5 774 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF852Q6ZMS4 543 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 TPGS1Q6ZTW0 290 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 SLFN11Q7Z7L1 901 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 CHSY1Q86X52 802 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 ETFBKMTQ8IXQ9 262 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 TTC8Q8TAM2 541 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 DDI1Q8WTU0 396 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 EXOC4Q96A65 974 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 CHFRQ96EP1 664 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 BTBD6Q96KE9 485 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 XPO6Q96QU8 1125 aaKnown RBP11.76□□□□□ -0.53
HSPG2-202ENST00000374676 NELL2Q99435 816 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 BBS2Q9BXC9 721 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 SLC2A11Q9BYW1 496 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 OSGEPQ9NPF4 335 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 FBXO10Q9UK96 956 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 CA14Q9ULX7 337 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
HSPG2-202ENST00000374676 ATG2BQ96BY7 2078 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 A0A0A0MRY4 1105 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 NEDD8-MDP1E9PL57 170 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 F5H5T6 163 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 CACNG3O60359 315 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 TSPAN3O60637 253 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 TYRP14679 529 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 MAN1A1P33908 653 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 OPRD1P41143 372 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 GALK1P51570 392 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
HSPG2-202ENST00000374676 CCDC173Q0VFZ6 552 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 RABGAP1LQ5R372 815 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 ERMARDQ5T6L9 678 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 FBXL22Q6P050 247 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 TXNDC11Q6PKC3 985 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 TPRG1Q6ZUI0 275 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 KIAA1328Q86T90 577 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 PSTKQ8IV42 348 aaKnown RBP11.75□□□□□ -0.53
HSPG2-202ENST00000374676 SUGP1Q8IWZ8 645 aaKnown RBP11.75□□□□□ -0.53
HSPG2-202ENST00000374676 LGI2Q8N0V4 545 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 SIX5Q8N196 739 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms