RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MYL3P08590 195 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 DARSP14868 501 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KCNE1P15382 129 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 ADORA2BP29275 332 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 MATKP42679 507 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 TAF6P49848 677 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 GBE1Q04446 702 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 MFSD10Q14728 455 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 TBCCQ15814 346 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 ACCSLQ4AC99 568 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 NCBP2-AS2Q69YL0 99 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KCNT2Q6UVM3 1135 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 LIMS2Q7Z4I7 341 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 MAB21L3Q8N8X9 362 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 DEPDC1BQ8WUY9 529 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 HTR3CQ8WXA8 447 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 BTBD10Q9BSF8 475 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KATNAL1Q9BW62 490 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 EIF2AQ9BY44 585 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 WWP1Q9H0M0 922 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KCNK13Q9HB14 408 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 MTMR10Q9NXD2 777 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 FZD10Q9ULW2 581 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 NME7Q9Y5B8 376 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 USP3Q9Y6I4 520 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 CXorf49A8MYA2 514 aaPredicted RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KPNA7A9QM74 516 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 DIAPH2O60879 1101 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 PEX11AO75192 247 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 ALDH1A2O94788 518 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 CSH1P0DML2 217 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 CSH2P0DML3 217 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 SMIM10L2AP0DMW4 78 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 SMIM10L2BP0DMW5 78 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 LCP1P13796 627 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 WARSP23381 471 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 EPHB2P29323 1055 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 CLNS1AP54105 237 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 TMPRSS15P98073 1019 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 SLC25A52Q3SY17 297 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 CMPK2Q5EBM0 449 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 LRRC8BQ6P9F7 803 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 NUDCD3Q8IVD9 361 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 APPL2Q8NEU8 664 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 KBTBD7Q8WVZ9 684 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 C18orf25Q96B23 403 aaPredicted RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 OXNAD1Q96HP4 312 aaPredicted RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 B3GNT5Q9BYG0 378 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 C12orf65Q9H3J6 166 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 PLAC1Q9HBJ0 212 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 MOCS1Q9NZB8 636 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 DTLQ9NZJ0 730 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 STAP1Q9ULZ2 295 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 RAD54BQ9Y620 910 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
HMGCL-203ENST00000374490 SDR42E2A6NKP2 422 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 PPP1R12AO14974 1030 aaPredicted RBP14.36□□□□□ -0.11
HMGCL-203ENST00000374490 IGHA2P01877 340 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 PGAM1P18669 254 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 PSEN2P49810 448 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 SULT1E1P49888 294 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 AIF1P55008 147 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 SLC10A2Q12908 348 aaPredicted RBP14.36□□□□□ -0.11
HMGCL-203ENST00000374490 CRYMQ14894 314 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 PDK1Q15118 436 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 FSCN1Q16658 493 aaKnown RBP14.36□□□□□ -0.11
HMGCL-203ENST00000374490 ANKRD20A2Q5SQ80 823 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 ANKRD20A1Q5TYW2 823 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 CRLF3Q8IUI8 442 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
HMGCL-203ENST00000374490 HNRNPABQ99729 332 aaKnown RBP14.36□□□□□ -0.11
HMGCL-203ENST00000374490 DPEP3Q9H4B8 488 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 FAM96AQ9H5X1 160 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 DCLRE1BQ9H816 532 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 SMYD2Q9NRG4 433 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 CITO14578 2027 aa14.36□□□□□ -0.11
HMGCL-203ENST00000374490 FCHO1O14526 889 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 GYG2O15488 501 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 HUS1O60921 280 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 GLRA3O75311 464 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 BPGMP07738 259 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 MYL2P10916 166 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 ESRRAP11474 423 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 CCDC130P13994 396 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 TFE3P19532 575 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 SERPINB3P29508 390 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 GLUD2P49448 558 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 BEX3Q00994 111 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 OCRLQ01968 901 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 CDHR3Q6ZTQ4 885 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 PDZD4Q76G19 769 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms