RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 AVILO75366 819 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 ZNF23P17027 643 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 POU6F1Q14863 301 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 RGPD2P0DJD1 1756 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 MAN1A2O60476 641 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 CD151P48509 253 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 SLC22A9Q8IVM8 553 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 EFHBQ8N7U6 833 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 DIS3LQ8TF46 1054 aaKnown RBP17.83■□□□□ 0.45
PTPRU-202ENST00000373779 ACO2Q99798 780 aaKnown RBP17.83■□□□□ 0.45
PTPRU-202ENST00000373779 EBNA1BP2Q99848 306 aaKnown RBP17.83■□□□□ 0.45
PTPRU-202ENST00000373779 TRHDEQ9UKU6 1024 aa17.83■□□□□ 0.45
PTPRU-202ENST00000373779 SLIT2O94813 1529 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 TBC1D12O60347 775 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 CRADDP78560 199 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 ACMSDQ8TDX5 336 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 BRD8Q9H0E9 1235 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 SLC30A1Q9Y6M5 507 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 SNED1Q8TER0 1413 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 CLASP2O75122 1294 aaKnown RBP17.83■□□□□ 0.44
PTPRU-202ENST00000373779 NFICP08651 508 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 ODC1P11926 461 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 MYL4P12829 197 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 POU4F1Q01851 419 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 BLOC1S5Q8TDH9 187 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 RNF112Q9ULX5 631 aa17.83■□□□□ 0.44
PTPRU-202ENST00000373779 GSTT1P30711 240 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 MRPS22P82650 360 aaKnown RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 SCARA3Q6AZY7 606 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 TNIP2Q8NFZ5 429 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 JOSD2Q8TAC2 188 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 STN1Q9H668 368 aaKnown RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 COPS7BQ9H9Q2 264 aaPredicted RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 TMCC1O94876 653 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 NFYCQ13952 458 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 LPCAT2Q7L5N7 544 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 TMC7Q7Z402 723 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 ARHGAP22Q7Z5H3 698 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 BSNDQ8WZ55 320 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 FAM8A1Q9UBU6 413 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 KANSL1LA0AUZ9 987 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 ABLIM1O14639 778 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 RPL14P50914 215 aaKnown RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 CHN2P52757 468 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 TDRPQ86YL5 185 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 SLC44A1Q8WWI5 657 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 MROH8Q9H579 483 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 EFR3BQ9Y2G0 817 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 CRABP2P29373 138 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 ALDH1A3P47895 512 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 RAD51Q06609 339 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 DDHD1Q8NEL9 900 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 CELF6Q96J87 481 aaKnown RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 NR1H4Q96RI1 486 aaPredicted RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 RBBP8Q99708 897 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 TRPC7Q9HCX4 862 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 MAFO75444 373 aaPredicted RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 CCNE2O96020 404 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 C4BPAP04003 597 aaKnown RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 ZNF286BP0CG31 522 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 PSMB4P28070 264 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 FASTKQ14296 549 aaKnown RBP17.82■□□□□ 0.44
PTPRU-202ENST00000373779 TBCELQ5QJ74 424 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 APBA2Q99767 749 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 ZNF670Q9BS34 389 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 CROTQ9UKG9 612 aa17.82■□□□□ 0.44
PTPRU-202ENST00000373779 SAC3D1A6NKF1 404 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 USP12O75317 370 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 PIGNO95427 931 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 COX4I1P13073 169 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 MAPRE1Q15691 268 aaKnown RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 FNBP1LQ5T0N5 605 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 PLD3Q8IV08 490 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 SLC2A14Q8TDB8 520 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 USP6NLQ92738 828 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 DLG3Q92796 817 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 RMND5BQ96G75 393 aaPredicted RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 MYO1GB0I1T2 1018 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 CHRM3P20309 590 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 PKNOX1P55347 436 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 ZC3H12AQ5D1E8 599 aaKnown RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 RNASEH2BQ5TBB1 312 aaKnown RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 ADGRD1Q6QNK2 874 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 VSTM1Q6UX27 236 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 DCP1BQ8IZD4 617 aaKnown RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 CPT1BQ92523 772 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 PRDM16Q9HAZ2 1276 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 PKP3Q9Y446 797 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 MT-CO1P00395 513 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 CCDC130P13994 396 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 GABRB2P47870 512 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 CHSY1Q86X52 802 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 BCAS3Q9H6U6 928 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 M0R3G1 203 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 SLC2A3P11169 496 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 CDKN2BP42772 138 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 PRPF18Q99633 342 aaKnown RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 ARHGEF3Q9NR81 526 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms