RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 TAGLNQ01995 201 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 KPNB1Q14974 876 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 UBAP2Q5T6F2 1119 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 CCNJLQ8IV13 435 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ZBED8Q8IZ13 594 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 KLHL29Q96CT2 875 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 TMA16Q96EY4 203 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 TNIP3Q96KP6 325 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ZNF341Q9BYN7 854 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 UNKQ9C0B0 810 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 FBXO28Q9NVF7 368 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 KIF17Q9P2E2 1029 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 PCDHGA8Q9Y5G5 932 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ACTL7BQ9Y614 415 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 TYW5A2RUC4 315 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ZBTB14O43829 449 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 CCNE2O96020 404 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 GNAZP19086 355 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 PTPN9P43378 593 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ATP5OP48047 213 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SEPHS1P49903 392 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ETV1P50549 477 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ROR1Q01973 937 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SF3A3Q12874 501 aaKnown RBP eCLIP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 OASLQ15646 514 aaKnown RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SPOPLQ6IQ16 392 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 VSTM1Q6UX27 236 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SLC47A2Q86VL8 602 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 PASD1Q8IV76 773 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 REM2Q8IYK8 340 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-201ENST00000373386 GAB3Q8WWW8 586 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SEMA4DQ92854 862 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 GRAMD1AQ96CP6 724 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 TEPSINQ96N21 525 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 TMEM39BQ9GZU3 492 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 PCIF1Q9H4Z3 704 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 SP140LQ9H930 580 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 ARHGEF3Q9NR81 526 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 PCDHGA3Q9Y5H0 932 aa8.47□□□□□ -1.05
GARNL3-201ENST00000373386 C1orf232A0A0U1RR37 186 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 KPNA5O15131 536 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 SLC16A4O15374 487 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 CYP26A1O43174 497 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 SORBS3O60504 671 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 TJP3O95049 919 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 PSAPP07602 524 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 TCEA1P23193 301 aaKnown RBP8.46□□□□□ -1.05
GARNL3-201ENST00000373386 PTPN7P35236 360 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 GPR85P60893 370 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 S100A12P80511 92 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 KRT17Q04695 432 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 ITGA9Q13797 1035 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 LRRC14Q15048 493 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 CCNG2Q16589 344 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 UGCGQ16739 394 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 XKR9Q5GH70 373 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 RNF43Q68DV7 783 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 DRICH1Q6PGQ1 229 aaPredicted RBP8.46□□□□□ -1.05
GARNL3-201ENST00000373386 MAEAQ7L5Y9 396 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 KCT2Q8NC54 265 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 REPS2Q8NFH8 660 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 COX4I2Q96KJ9 171 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 CEP170P1Q96L14 293 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 ZBED2Q9BTP6 218 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 DDX23Q9BUQ8 820 aaKnown RBP8.46□□□□□ -1.05
GARNL3-201ENST00000373386 CCDC106Q9BWC9 280 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 DENND2DQ9H6A0 471 aaPredicted RBP8.46□□□□□ -1.05
GARNL3-201ENST00000373386 GIN1Q9NXP7 522 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 ZNF112Q9UJU3 913 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 RNF112Q9ULX5 631 aa8.46□□□□□ -1.05
GARNL3-201ENST00000373386 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.46□□□□□ -1.05
GARNL3-201ENST00000373386 ADGRA3Q8IWK6 1321 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 BRCA1P38398 1863 aaKnown RBP8.46□□□□□ -1.06
GARNL3-201ENST00000373386 DOCK5Q9H7D0 1870 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 A0A0G2JMZ2 1700 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 TCRBV7S2A1N4TA0A589 114 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 DENND3A2RUS2 1198 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 WNT10BO00744 389 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 GPC4O75487 556 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 ACSL3O95573 720 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 TTC4O95801 387 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 CALB2P22676 271 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 VAMP1P23763 118 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 TARSP26639 723 aaKnown RBP8.46□□□□□ -1.06
GARNL3-201ENST00000373386 STT3AP46977 705 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 ACVR2BQ13705 512 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 SF3B4Q15427 424 aaKnown RBP eCLIP8.46□□□□□ -1.06
GARNL3-201ENST00000373386 GSTA3Q16772 222 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 CYP4A22Q5TCH4 519 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 SLFN12LQ6IEE8 588 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 SLC39A4Q6P5W5 647 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 CBWD2Q8IUF1 395 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 NIM1KQ8IY84 436 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 MCOLN2Q8IZK6 566 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 PPM1KQ8N3J5 372 aa8.46□□□□□ -1.06
GARNL3-201ENST00000373386 RIBC1Q8N443 379 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms