RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 SDC4P31431 198 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 IGBP1P78318 339 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 PCLAFQ15004 111 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 SLC9B1Q4ZJI4 515 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 C6orf52Q5T4I8 152 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 SNRNP27Q8WVK2 155 aaKnown RBP18.27■□□□□ 0.52
VPS26A-202ENST00000373382 FAM159BA6NKW6 160 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 CCNT2O60583 730 aaKnown RBP18.27■□□□□ 0.51
VPS26A-202ENST00000373382 ABCD1P33897 745 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 SERPINB9P50453 376 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 AP3M2P53677 418 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 ENPEPQ07075 957 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 LAMTOR4Q0VGL1 99 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 MAP3K21Q5TCX8 1036 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 FAM156AQ8NDB6 213 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 LGMNQ99538 433 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 UNKQ9C0B0 810 aaKnown RBP18.27■□□□□ 0.51
VPS26A-202ENST00000373382 LMCD1Q9NZU5 365 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 TSPAN16Q9UKR8 245 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 SSX2IPQ9Y2D8 614 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 PCDHA11Q9Y5I1 949 aa18.27■□□□□ 0.51
VPS26A-202ENST00000373382 DOCK5Q9H7D0 1870 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 GLRA3O75311 464 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 EGFRP00533 1210 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 PIGRP01833 764 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 FAM200BP0CF97 657 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 SRGAP2BP0DMP2 458 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 GPD2P43304 727 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 ACAP1Q15027 740 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 NADK2Q4G0N4 442 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 PACS1Q6VY07 963 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 SNX32Q86XE0 403 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 ACTRT2Q8TDY3 377 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 LHX5Q9H2C1 402 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 CAB39LQ9H9S4 337 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 MAP3K20Q9NYL2 800 aaKnown RBP18.26■□□□□ 0.51
VPS26A-202ENST00000373382 CPSF3Q9UKF6 684 aaKnown RBP18.26■□□□□ 0.51
VPS26A-202ENST00000373382 TCF7P36402 384 aaPredicted RBP18.26■□□□□ 0.51
VPS26A-202ENST00000373382 CCR10P46092 362 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 NDST1P52848 882 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 ABCE1P61221 599 aaKnown RBP18.26■□□□□ 0.51
VPS26A-202ENST00000373382 FLOT2Q14254 428 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 DLG2Q15700 870 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 MAP1SQ66K74 1059 aaPredicted RBP18.26■□□□□ 0.51
VPS26A-202ENST00000373382 C1orf127Q8N9H9 656 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 NRDE2Q9H7Z3 1164 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 UBAP1Q9NZ09 502 aa18.26■□□□□ 0.51
VPS26A-202ENST00000373382 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 C2CD4BA6NLJ0 364 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 GOLGA8TH3BQL2 631 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 STX16-NPEPL1H3BU86 382 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 CPA3P15088 417 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 SLC10A2Q12908 348 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 TMEM132BQ14DG7 1078 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 STXBP2Q15833 593 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 CCDC14Q49A88 953 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 ATF7IP2Q5U623 682 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 ZNF534Q76KX8 674 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 ZSCAN18Q8TBC5 510 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 DTNBP1Q96EV8 351 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 MCRS1Q96EZ8 462 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 OR52B2Q96RD2 323 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 ITGA11Q9UKX5 1188 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 FIS1Q9Y3D6 152 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 SPATA31C2B4DYI2 1134 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 GSRP00390 522 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 ITGA2BP08514 1039 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 EPHA3P29320 983 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 HNRNPDQ14103 355 aaKnown RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 PDK1Q15118 436 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 CYP4V2Q6ZWL3 525 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 PQLC1Q8N2U9 271 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 JADE3Q92613 823 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 HAPLN3Q96S86 360 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 SORT1Q99523 831 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 LPIN3Q9BQK8 851 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 SIX4Q9UIU6 781 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 AP4B1Q9Y6B7 739 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 NRXN2Q9P2S2 1712 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 SF3B1O75533 1304 aaKnown RBP eCLIP18.25■□□□□ 0.518e-11■■■□□ 18.8
VPS26A-202ENST00000373382 TBC1D12O60347 775 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 KLF10Q13118 480 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 STILQ15468 1287 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 NRF1Q16656 503 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 UGT2A3Q6UWM9 527 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 MAPK15Q8TD08 544 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 DGCR14Q96DF8 476 aaKnown RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 KCNK16Q96T55 309 aa18.25■□□□□ 0.51
VPS26A-202ENST00000373382 MRPL1Q9BYD6 325 aaKnown RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 MAFBQ9Y5Q3 323 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-202ENST00000373382 TMA16Q96EY4 203 aaKnown RBP18.24■□□□□ 0.51
VPS26A-202ENST00000373382 COPG2Q9UBF2 871 aa18.24■□□□□ 0.51
VPS26A-202ENST00000373382 AFG3L2Q9Y4W6 797 aa18.24■□□□□ 0.51
VPS26A-202ENST00000373382 ASLP04424 464 aa18.24■□□□□ 0.51
VPS26A-202ENST00000373382 CLCN3P51790 818 aa18.24■□□□□ 0.51
VPS26A-202ENST00000373382 JADE1Q6IE81 842 aa18.24■□□□□ 0.51
VPS26A-202ENST00000373382 KLHDC10Q6PID8 442 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms