RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ATP9AO75110 1047 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 YBX3P16989 372 aaKnown RBP eCLIP10.75□□□□□ -0.698e-7■■■□□ 19.2
NUP188-201ENST00000372577 TUBP50607 506 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 PRMT9Q6P2P2 845 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 YTHDF3Q7Z739 585 aaKnown RBP10.75□□□□□ -0.69
NUP188-201ENST00000372577 MTDHQ86UE4 582 aaKnown RBP10.75□□□□□ -0.69
NUP188-201ENST00000372577 PALB2Q86YC2 1186 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 TMEM139Q8IV31 216 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 TSEN2Q8NCE0 465 aaKnown RBP10.75□□□□□ -0.69
NUP188-201ENST00000372577 SORCS3Q9UPU3 1222 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 STARD13Q9Y3M8 1113 aa10.75□□□□□ -0.69
NUP188-201ENST00000372577 VPS4BO75351 444 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PSEN1P49768 467 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PEX5P50542 639 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 N4BP2L1Q5TBK1 243 aaPredicted RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 GRAMD4Q6IC98 578 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 C16orf87Q6PH81 154 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 SGF29Q96ES7 293 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 FAXDC2Q96IV6 333 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 NIFKQ9BYG3 293 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 IL22Q9GZX6 179 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 A0A087X1B8 175 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 MAGEA13PA6NCF6 341 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 B4GALT4O60513 344 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 FARP2O94887 1054 aaPredicted RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 UBOX5O94941 541 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 POMCP01189 267 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 CKMP06732 381 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 NFICP08651 508 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 AVPR1AP37288 418 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 CRYBB1P53674 252 aaPredicted RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 MRPS6P82932 125 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 COL9A3Q14050 684 aaPredicted RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 TMCO4Q5TGY1 634 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 MAP1SQ66K74 1059 aaPredicted RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 ILDR2Q71H61 639 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 CARNMT1Q8N4J0 409 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PRELID2Q8N945 189 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PPTC7Q8NI37 304 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 ECSITQ9BQ95 431 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 CLUHO75153 1309 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 A0A0B4J269 797 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 WDR27A2RRH5 827 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 TRIM16O95361 564 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 SMIM10L2AP0DMW4 78 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 SMIM10L2BP0DMW5 78 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 ACAT1P24752 427 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 MGAT1P26572 445 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 TKTP29401 623 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 SLC1A6P48664 564 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 TMED1Q13445 227 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 ZNF398Q8TD17 642 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 TEKT4Q8WW24 435 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 RNF157Q96PX1 679 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 GIMAP4Q9NUV9 329 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PCDHB12Q9Y5F1 795 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 KCPQ6ZWJ8 1503 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 FCGR1AP12314 374 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 RBL1P28749 1068 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 SSTR1P30872 391 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 ANXA11P50995 505 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 MSLNQ13421 630 aaPredicted RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 XRCC4Q13426 336 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 ZNF284Q2VY69 593 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PSTKQ8IV42 348 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 TOP6BLQ8N6T0 577 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 RMDN2Q96LZ7 410 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 REXO2Q9Y3B8 237 aaKnown RBP10.74□□□□□ -0.69
NUP188-201ENST00000372577 DTNAQ9Y4J8 743 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 PCDHAC2Q9Y5I4 1007 aa10.74□□□□□ -0.69
NUP188-201ENST00000372577 CPA2P48052 419 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 EVX2Q03828 476 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 MAD2L1Q13257 205 aaPredicted RBP10.73□□□□□ -0.69
NUP188-201ENST00000372577 UGCGQ16739 394 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 ACMSDQ8TDX5 336 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 EDEM1Q92611 657 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 DTNBP1Q96EV8 351 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 MBOAT7Q96N66 472 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 ULBP1Q9BZM6 244 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 TMCO1Q9UM00 188 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 hCG_1818297A0A087WSY0 165 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 C2CD2LO14523 706 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 CCDC130P13994 396 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 RCN1Q15293 331 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 CYTH1Q15438 398 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
NUP188-201ENST00000372577 ZCWPW2Q504Y3 356 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 FAM117BQ6P1L5 589 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 FAM183BPQ6ZVS7 135 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 IFNEQ86WN2 208 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 DDI1Q8WTU0 396 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 LENG9Q96B70 501 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 CNDP1Q96KN2 507 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 CTNNAL1Q9UBT7 734 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 MORF4L1Q9UBU8 362 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 CYP1A1P04798 512 aaPredicted RBP10.73□□□□□ -0.69
NUP188-201ENST00000372577 BMPR2Q13873 1038 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 TMEM154Q6P9G4 183 aa10.73□□□□□ -0.69
NUP188-201ENST00000372577 HS6ST3Q8IZP7 471 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms