RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ACSL4O60488 711 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 PRAMEF12O95522 483 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 MOCS2O96007 188 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-204ENST00000372243 KLKB1P03952 638 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 IRF1P10914 325 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 HTR7P34969 479 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 CDH6P55285 790 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 AMPD2Q01433 879 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 USP4Q13107 963 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 CLUL1Q15846 466 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 TAZQ16635 292 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 ZFYVE27Q5T4F4 411 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 SH3RF2Q8TEC5 729 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 RAPGEF5Q92565 580 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 DDX50Q9BQ39 737 aaKnown RBP16.4■□□□□ 0.22
TMEM53-204ENST00000372243 ZNF670Q9BS34 389 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 PCDH18Q9HCL0 1135 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 GPATCH2LQ9NWQ4 482 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 CFAP97Q9P2B7 532 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 AGO1Q9UL18 857 aaKnown RBP16.4■□□□□ 0.22
TMEM53-204ENST00000372243 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
TMEM53-204ENST00000372243 LRRD1A4D1F6 860 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 C3orf70A6NLC5 250 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-204ENST00000372243 MBTPS2O43462 519 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 PYGMP11217 842 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 PTPN7P35236 360 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 CETN2P41208 172 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 HCAR3P49019 387 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 DNA2P51530 1060 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 KRT81Q14533 505 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 ZNF77Q15935 545 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 MS4A13Q5J8X5 152 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 FAM78AQ5JUQ0 283 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 PIK3R6Q5UE93 754 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 DENND1CQ8IV53 801 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 FAM217AQ8IXS0 508 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 PPM1EQ8WY54 764 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 TSC1Q92574 1164 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 WBP2Q969T9 261 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 E2F7Q96AV8 911 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 ACSF2Q96CM8 615 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-204ENST00000372243 KCTD15Q96SI1 283 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-204ENST00000372243 SMG9Q9H0W8 520 aaKnown RBP16.39■□□□□ 0.21
TMEM53-204ENST00000372243 XPO7Q9UIA9 1087 aaKnown RBP16.39■□□□□ 0.21
TMEM53-204ENST00000372243 EFR3BQ9Y2G0 817 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 DOCK8Q8NF50 2099 aa16.39■□□□□ 0.21
TMEM53-204ENST00000372243 GRXCR2A6NFK2 248 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 LAMP2P13473 410 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 ARL4AP40617 200 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 TFDP3Q5H9I0 405 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 ADGRF1Q5T601 910 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 SEL1L2Q5TEA6 688 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 MANEALQ5VSG8 457 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PYROXD2Q8N2H3 581 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 ZNF592Q92610 1267 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 RNF25Q96BH1 459 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 FAF2Q96CS3 445 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 MYADMQ96S97 322 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PSMB7Q99436 277 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 EPAS1Q99814 870 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PRMT1Q99873 361 aaKnown RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 MAGEB5Q9BZ81 275 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 SIK2Q9H0K1 926 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PRDM16Q9HAZ2 1276 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 BRWD1Q9NSI6 2320 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PI4K2BG5E9Z4 385 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 H3BRJ5 948 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CD48P09326 243 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 IL4RP24394 825 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 HOXC13P31276 330 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CXCR5P32302 372 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 GBP2P32456 591 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CHKAP35790 457 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CDKN2BP42772 138 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 TUBB2AQ13885 445 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 LEXMQ3ZCV2 418 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 C5orf22Q49AR2 442 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 FAM133BQ5BKY9 247 aaKnown RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 NADSYN1Q6IA69 706 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CCDC50Q8IVM0 306 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 RASGEF1CQ8N431 466 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CPXM2Q8N436 756 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 OTUB2Q96DC9 234 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 TUBB2BQ9BVA1 445 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CALN1Q9BXU9 219 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 CWC15Q9P013 229 aaKnown RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 TBC1D14Q9P2M4 693 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 EPS15L1Q9UBC2 864 aa16.38■□□□□ 0.21
TMEM53-204ENST00000372243 PPARGC1AQ9UBK2 798 aaKnown RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 TTC7AQ9ULT0 858 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-204ENST00000372243 XIRP2A4UGR9 3374 aa16.37■□□□□ 0.21
TMEM53-204ENST00000372243 IGLV3-10A0A075B6K4 115 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms