RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PNKPQ96T60 521 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 ADAM33Q9BZ11 813 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 WDCPQ9H6R7 721 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 NHEJ1Q9H9Q4 299 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 ARHGEF4Q9NR80 690 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 DEC1Q9P2X7 70 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 XPO7Q9UIA9 1087 aaKnown RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 ZDBF2Q9HCK1 2354 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 GOLGA6L7A0A1B0GV03 622 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 F5H5T6 163 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 CCP110O43303 1012 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 EGFP01133 1207 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 PENKP01210 267 aaPredicted RBP15.37■□□□□ 0.05
COL9A1-204ENST00000370496 APODP05090 189 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 TACR2P21452 398 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 CXCR3P49682 368 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 GALK1P51570 392 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 ATXN1P54253 815 aaKnown RBP15.37■□□□□ 0.05
COL9A1-204ENST00000370496 RPL7AP62424 266 aaKnown RBP15.37■□□□□ 0.05
COL9A1-204ENST00000370496 MAMLD1Q13495 774 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 EIF4EBP2Q13542 120 aaPredicted RBP15.37■□□□□ 0.05
COL9A1-204ENST00000370496 CCDC14Q49A88 953 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 PPP1R15BQ5SWA1 713 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 FYB2Q5VWT5 728 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 PLEKHA7Q6IQ23 1121 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 STRADAQ7RTN6 431 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 FAM131BQ86XD5 332 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 ETFBKMTQ8IXQ9 262 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 SPC24Q8NBT2 197 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 PRICKLE1Q96MT3 831 aaPredicted RBP15.37■□□□□ 0.05
COL9A1-204ENST00000370496 CHP1Q99653 195 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 TKTL2Q9H0I9 626 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 LMAN1LQ9HAT1 526 aa15.37■□□□□ 0.05
COL9A1-204ENST00000370496 MRPL47Q9HD33 250 aaKnown RBP15.37■□□□□ 0.05
COL9A1-204ENST00000370496 PAGE1O75459 146 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 KAT7O95251 611 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CHRNB1P11230 501 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 PSMA2P25787 234 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 HOXD9P28356 352 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 AVPR2P30518 371 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 RPS9P46781 194 aaKnown RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 SLC6A11P48066 632 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 DGKGP49619 791 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 SGSHP51688 502 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 ZNF143P52747 638 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CCINQ13939 588 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 PIK3R6Q5UE93 754 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 LGI2Q8N0V4 545 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 ZNF687Q8N1G0 1237 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 TERB1Q8NA31 727 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CTNNBL1Q8WYA6 563 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 TMA16Q96EY4 203 aaKnown RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CNPY3Q9BT09 278 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 IRX2Q9BZI1 471 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 THAP2Q9H0W7 228 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 SPTLC3Q9NUV7 552 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 ARHGEF38Q9NXL2 777 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 TBL1XO60907 577 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 GGCXP38435 758 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 GRIA2P42262 883 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 ARL13BQ3SXY8 428 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 FBXO43Q4G163 708 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 RABGAP1LQ5R372 815 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 C10orf76Q5T2E6 689 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 Q6ZS52 159 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 NUDT18Q6ZVK8 323 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 BNIPLQ7Z465 357 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CCDC117Q8IWD4 279 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CLDN23Q96B33 292 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 RPRD1AQ96P16 312 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 PANX2Q96RD6 677 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 IER2Q9BTL4 223 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 SIK2Q9H0K1 926 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 CHRDQ9H2X0 955 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 FBRSL1Q9HCM7 1045 aaKnown RBP15.36■□□□□ 0.05
COL9A1-204ENST00000370496 STIM2Q9P246 746 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 IMPACTQ9P2X3 320 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 NENFQ9UMX5 172 aa15.36■□□□□ 0.05
COL9A1-204ENST00000370496 ZNF318Q5VUA4 2279 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 TBC1D3BA6NDS4 549 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 GOLGA6L3A6NEY3 463 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 RNF40O75150 1001 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 GALCP54803 685 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 SEC13P55735 322 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 HDAC4P56524 1084 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 RPS24P62847 133 aaKnown RBP15.35■□□□□ 0.05
COL9A1-204ENST00000370496 OGDHQ02218 1023 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 CDH18Q13634 790 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 ASTE1Q2TB18 679 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-204ENST00000370496 SH3PXD2AQ5TCZ1 1133 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 TTC39BQ5VTQ0 682 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-204ENST00000370496 ANKS1BQ7Z6G8 1248 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 MFN1Q8IWA4 741 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 CFAP52Q8N1V2 620 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 SYNPOQ8N3V7 929 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 ZNF557Q8N988 423 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-204ENST00000370496 DTWD2Q8NBA8 298 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms