RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 LY6G5CQ5SRR4 150 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 MPP7Q5T2T1 576 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 NADSYN1Q6IA69 706 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 SCYL2Q6P3W7 929 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 SLFN11Q7Z7L1 901 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 RALGPS2Q86X27 583 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 EDAQ92838 391 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 FBXL21Q9UKT6 434 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 TYW5A2RUC4 315 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 F5H5T6 163 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 GFRA2O00451 464 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 PRPSAP2O60256 369 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 CCDC175P0C221 793 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 TACR2P21452 398 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 NOP2P46087 812 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 SIGLEC14Q08ET2 396 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 TPGS1Q6ZTW0 290 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 CHSY1Q86X52 802 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 PSTKQ8IV42 348 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 SHDQ96IW2 340 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 BTBD6Q96KE9 485 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 PRMT1Q99873 361 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 TSGA10Q9BZW7 698 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 HEBP1Q9NRV9 189 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 HS3ST4Q9Y661 456 aa16.09■□□□□ 0.17
PRPF38B-202ENST00000370022 MUC3AQ02505 3323 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 OTOL1A6NHN0 477 aaPredicted RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 MAN2B1O00754 1011 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 PENKP01210 267 aaPredicted RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 MIPP30301 263 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 SLC6A4P31645 630 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 GJA4P35212 333 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 SLC1A1P43005 524 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 MLF2Q15773 248 aaPredicted RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 IFI16Q16666 785 aaKnown RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 HADHQ16836 314 aaKnown RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 ANO4Q32M45 955 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 RAB6CQ53S08 254 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 EFHC2Q5JST6 749 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 RABGAP1LQ5R372 815 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 PIK3R6Q5UE93 754 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 RAP1GAP2Q684P5 730 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 LRRC31Q6UY01 552 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 ARFGAP1Q8N6T3 406 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 ZNF557Q8N988 423 aaPredicted RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 DDI1Q8WTU0 396 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 RAB6CQ9H0N0 254 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 OSBPL2Q9H1P3 480 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 ANLNQ9NQW6 1124 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 ARHGEF3Q9NR81 526 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 USP18Q9UMW8 372 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
PRPF38B-202ENST00000370022 MYO10Q9HD67 2058 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 NEDD8-MDP1E9PL57 170 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 SPECC1L-ADORA2AF8WAN1 911 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 I6L893 689 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 EIF2DP41214 584 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 VCPP55072 806 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 NRG1Q02297 640 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 AUHQ13825 339 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 MESDQ14696 234 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 PREPLQ4J6C6 727 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 BOLA3Q53S33 107 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 FYB2Q5VWT5 728 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 ZNF662Q6ZS27 426 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 CCDC185Q8N715 623 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 LACRTQ9GZZ8 138 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 FZD10Q9ULW2 581 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 TFR2Q9UP52 801 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 COL4A2P08572 1712 aa16.07■□□□□ 0.16
PRPF38B-202ENST00000370022 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 PI4K2BG5E9Z4 385 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 TNFRSF10AO00220 468 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 KRT86O43790 486 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 CACNG3O60359 315 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 TYRP14679 529 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 CTHP32929 405 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 C5orf22Q49AR2 442 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 ERMARDQ5T6L9 678 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 C11orf63Q6NUN7 778 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 FBXL22Q6P050 247 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 RFWD3Q6PCD5 774 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 SUGP1Q8IWZ8 645 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 LGI2Q8N0V4 545 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 SLC2A11Q9BYW1 496 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 SIK2Q9H0K1 926 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 OR12D3Q9UGF7 316 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 PCSK1NQ9UHG2 260 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms