RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 WDR55Q9H6Y2 383 aaPredicted RBP11.22□□□□□ -0.61
LRIF1-201ENST00000369763 SYBUQ9NX95 663 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 DTLQ9NZJ0 730 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 RPS6KL1Q9Y6S9 549 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 BRWD3Q6RI45 1802 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 AMHP03971 560 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 STILQ15468 1287 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 DCAF6Q58WW2 860 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 SPDYAQ5MJ70 313 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 PLD6Q8N2A8 252 aaKnown RBP11.22□□□□□ -0.61
LRIF1-201ENST00000369763 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.22□□□□□ -0.61
LRIF1-201ENST00000369763 DNAAF3Q8N9W5 541 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 PPP4R1Q8TF05 950 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 C7orf26Q96N11 449 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
LRIF1-201ENST00000369763 ECSITQ9BQ95 431 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 THAP1Q9NVV9 213 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 EMCNQ9ULC0 261 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 SOX13Q9UN79 622 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
LRIF1-201ENST00000369763 A0A088AWK7 358 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 MYOCOSA0A1B0GUC4 107 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 PGM3O95394 542 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 PRKCHP24723 683 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 AQP4P55087 323 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 ACTR3P61158 418 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 IRF9Q00978 393 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 SATB1Q01826 763 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 SFT2D3Q587I9 215 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 LBX2Q6XYB7 198 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 MAVSQ7Z434 540 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 TBCBQ99426 244 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 ZNF212Q9UDV6 495 aa11.21□□□□□ -0.61
LRIF1-201ENST00000369763 CCDC160A6NGH7 325 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 MFSD11O43934 449 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 SPAG6O75602 509 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 PROZP22891 400 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 L1CAMP32004 1257 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 AVPR1AP37288 418 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 COPAP53621 1224 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 SLC6A3Q01959 620 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 NXNQ6DKJ4 435 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 FRMD7Q6ZUT3 714 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 PID1Q7Z2X4 250 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 CHST13Q8NET6 341 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.627e-7■■□□□ 13.2
LRIF1-201ENST00000369763 USP13Q92995 863 aaPredicted RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 FAM167AQ96KS9 214 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 ZMAT2Q96NC0 199 aaKnown RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 CSPG4P5Q96PW8 444 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 FRMD8P1Q9BZ68 369 aaPredicted RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 GBA2Q9HCG7 927 aaPredicted RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 ADAMTS6Q9UKP5 1117 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 RNF103O00237 685 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 CLDN5O00501 218 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 FGF3P11487 239 aaPredicted RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 CRHR1P34998 444 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.62
LRIF1-201ENST00000369763 DLG1Q12959 904 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 EFHC1Q5JVL4 640 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 PPM1LQ5SGD2 360 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 PDPK2PQ6A1A2 396 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 PACS1Q6VY07 963 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 RNF111Q6ZNA4 994 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 PNPLA1Q8N8W4 532 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 HTR3CQ8WXA8 447 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 GCNAQ96QF7 691 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 TNFSF13BQ9Y275 285 aa11.21□□□□□ -0.62
LRIF1-201ENST00000369763 TRIP11Q15643 1979 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 MAGEA13PA6NCF6 341 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 SDR42E2A6NKP2 422 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 SERPINA6P08185 405 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 ITGA2BP08514 1039 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 RAG1P15918 1043 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 RBP5P82980 135 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 TRMT5Q32P41 509 aaKnown RBP11.2□□□□□ -0.62
LRIF1-201ENST00000369763 HSP90AA5PQ58FG0 334 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 MBLAC2Q68D91 279 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 LCLAT1Q6UWP7 414 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 PTAR1Q7Z6K3 402 aaPredicted RBP11.2□□□□□ -0.62
LRIF1-201ENST00000369763 CDKL3Q8IVW4 592 aaPredicted RBP11.2□□□□□ -0.62
LRIF1-201ENST00000369763 TRIM42Q8IWZ5 723 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 ZNF781Q8N8C0 355 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 ACVR1CQ8NER5 493 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 PCDHA11Q9Y5I1 949 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 WDR81Q562E7 1941 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 FAM159BA6NKW6 160 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 ENDOD1O94919 500 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 IL18RAPO95256 599 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 HSPA4LO95757 839 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 NDUFV1P49821 464 aa11.2□□□□□ -0.62
LRIF1-201ENST00000369763 PKNOX1P55347 436 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms