RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CNGB3Q9NQW8 809 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 NMRK1Q9NWW6 199 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 DCTN4Q9UJW0 460 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.49□□□□□ -1.21
VTA1-202ENST00000367630 LY75O60449 1722 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 TPBGLP0DKB5 382 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 ELK3P41970 407 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 GMPSP49915 693 aaPredicted RBP7.49□□□□□ -1.21
VTA1-202ENST00000367630 ATP4BP51164 291 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 PRAMEP78395 509 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
VTA1-202ENST00000367630 TRAP1Q12931 704 aaKnown RBP7.49□□□□□ -1.21
VTA1-202ENST00000367630 RABGAP1LQ5R372 815 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 SLC30A10Q6XR72 485 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 SPATA2LQ8IUW3 424 aaPredicted RBP7.49□□□□□ -1.21
VTA1-202ENST00000367630 PEX13Q92968 403 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 GCNAQ96QF7 691 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 PLLPQ9Y342 182 aa7.49□□□□□ -1.21
VTA1-202ENST00000367630 TNPO3Q9Y5L0 923 aaKnown RBP7.49□□□□□ -1.21
VTA1-202ENST00000367630 FAM237BA0A1B0GVD1 139 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 USP1O94782 785 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 UMPSP11172 480 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 MIPP30301 263 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 KCNJ1P48048 391 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 USP10Q14694 798 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 TTLL9Q3SXZ7 439 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CAPN12Q6ZSI9 719 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ADGRF2Q8IZF7 708 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 MIEF2Q96C03 454 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RAD21L1Q9H4I0 556 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 GGA3Q9NZ52 723 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 VANGL2Q9ULK5 521 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 M0R3G1 203 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ZNF862O60290 1169 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RPL10AP62906 217 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 FOXM1Q08050 763 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 BLMHQ13867 455 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 FLOT2Q14254 428 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 DCAF6Q58WW2 860 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ZDHHC20Q5W0Z9 365 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 MYO1HQ8N1T3 1032 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CEP295NLQ96MC4 621 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RHOBTB2Q9BYZ6 727 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 TMEM39BQ9GZU3 492 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 XIRP1Q702N8 1843 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 DDX60LQ5H9U9 1706 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 CHRNA5P30532 468 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RAD51Q06609 339 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RFX4Q33E94 735 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 FRA10AC1Q70Z53 315 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CEP70Q8NHQ1 597 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 SLC26A7Q8TE54 656 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 WNT8BQ93098 351 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 VPS33AQ96AX1 596 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 FAM210AQ96ND0 272 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 MRPL57Q9BQC6 102 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 CHST7Q9NS84 486 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 DEAF1O75398 565 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 TM7SF2O76062 418 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 IFNA8P32881 189 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CCNFP41002 786 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CD151P48509 253 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ATP6V0D1P61421 351 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 IFI35P80217 286 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 SEMA5AQ13591 1074 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 HP1BP3Q5SSJ5 553 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 FAM45BPQ6NSW5 357 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 TRIM69Q86WT6 500 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 FAM45AQ8TCE6 357 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ZFAND2BQ8WV99 257 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RTP4Q96DX8 246 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CATSPER2Q96P56 530 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 HOPXQ9BPY8 73 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 TCF7L2Q9NQB0 619 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 C20orf96Q9NUD7 363 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 POLG2Q9UHN1 485 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 A0A1W2PQ67 120 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 MATN2O00339 956 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 TBC1D4O60343 1298 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 BPGMP07738 259 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 FAM58BPP0C7Q3 252 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 WARSP23381 471 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 KCNK10P57789 538 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 YWHAZP63104 245 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 C15orf39Q6ZRI6 1047 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 BEND5Q7L4P6 421 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ABI1Q8IZP0 508 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 BANPQ8N9N5 519 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 PDZD8Q8NEN9 1154 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 SLC7A14Q8TBB6 771 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 KCTD13Q8WZ19 329 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 PPWD1Q96BP3 646 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 PCDHB18PQ96TA0 734 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 OSBPL11Q9BXB4 747 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 OSBPL6Q9BZF3 934 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ABHD16BQ9H3Z7 469 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 TASP1Q9H6P5 420 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RMND5AQ9H871 391 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 C10orf88Q9H8K7 445 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms