RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CPA3P15088 417 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 NELFEP18615 380 aaKnown RBP8.42□□□□□ -1.06
CD46-208ENST00000367042 ARL4AP40617 200 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 GARSP41250 739 aaKnown RBP8.42□□□□□ -1.06
CD46-208ENST00000367042 ALDH1A3P47895 512 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 IDH3AP50213 366 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 CHN2P52757 468 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 CXCL9Q07325 125 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 ART3Q13508 389 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 R3HDM1Q15032 1099 aaKnown RBP8.42□□□□□ -1.06
CD46-208ENST00000367042 FSCBQ5H9T9 825 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 MAP3K21Q5TCX8 1036 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 TMCO4Q5TGY1 634 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 SH2D5Q6ZV89 423 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 COLGALT1Q8NBJ5 622 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 NAT14Q8WUY8 206 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 AZIN2Q96A70 460 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 ZNF669Q96BR6 464 aaPredicted RBP8.42□□□□□ -1.06
CD46-208ENST00000367042 CAMKK2Q96RR4 588 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 KCNK16Q96T55 309 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 LHX5Q9H2C1 402 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 TMEM134Q9H6X4 195 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 GPAMQ9HCL2 828 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 ZNF180Q9UJW8 692 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 MFHAS1Q9Y4C4 1052 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 MAFBQ9Y5Q3 323 aaPredicted RBP8.42□□□□□ -1.06
CD46-208ENST00000367042 ADGRA2Q96PE1 1338 aa8.42□□□□□ -1.06
CD46-208ENST00000367042 LOXHD1Q8IVV2 1947 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 C2CD4BA6NLJ0 364 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 ITGA2BP08514 1039 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 STAG3L1P0CL83 205 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 TFE3P19532 575 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 GPD2P43304 727 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 GABRB2P47870 512 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 CCNIQ14094 377 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 RARS2Q5T160 578 aaKnown RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 TEDDM1Q5T9Z0 273 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 KYAT3Q6YP21 454 aaKnown RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 ARCQ7LC44 396 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PID1Q7Z2X4 250 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SESTD1Q86VW0 696 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SULF1Q8IWU6 871 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 ZNF781Q8N8C0 355 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PHF12Q96QT6 1004 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 CDRT15Q96T59 188 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 NRDE2Q9H7Z3 1164 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 COG4Q9H9E3 785 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 AS3MTQ9HBK9 375 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 ADA2Q9NZK5 511 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SSX2IPQ9Y2D8 614 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 AFG3L2Q9Y4W6 797 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PCDHA11Q9Y5I1 949 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 KCNK1O00180 336 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PLIN3O60664 434 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PIGRP01833 764 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SRGAP2BP0DMP2 458 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 COX4I1P13073 169 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 AOC1P19801 751 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PRKCHP24723 683 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 EPHA3P29320 983 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PGGT1BP53609 377 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 ABCE1P61221 599 aaKnown RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 IFRD2Q12894 506 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 PSME4Q14997 1843 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PDK2Q15119 407 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 CCDC14Q49A88 953 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PPM1LQ5SGD2 360 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 MAP1SQ66K74 1059 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 TRNP1Q6NT89 227 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 EFCAB12Q6NXP0 572 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PACS1Q6VY07 963 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 PQLC3Q8N755 202 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 CCNYL1Q8N7R7 359 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SEPT1Q8WYJ6 367 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 IFT43Q96FT9 208 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 SIGLEC10Q96LC7 697 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 LENG8Q96PV6 779 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 LPIN3Q9BQK8 851 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 NT5C1AQ9BXI3 368 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 FRMD8Q9BZ67 464 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 ANLNQ9NQW6 1124 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 KLHL8Q9P2G9 620 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 ZNF214Q9UL59 606 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 COMMD3-BMI1R4GMX3 469 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 HMX2A2RU54 273 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 XPO1O14980 1071 aaKnown RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 BIRC5O15392 142 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 AMHP03971 560 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 ALDOAP04075 364 aaKnown RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 SPATA31D3P0C874 917 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 VDRP11473 427 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 FGF3P11487 239 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 ITGAXP20702 1163 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 TGM2P21980 687 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 CDH5P33151 784 aaPredicted RBP8.41□□□□□ -1.06
CD46-208ENST00000367042 AVPR1AP37288 418 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 NME3Q13232 169 aa8.41□□□□□ -1.06
CD46-208ENST00000367042 MXD4Q14582 209 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms