RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CREB3O43889 395 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 RNASEH1O60930 286 aaKnown RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 ENO1P06733 434 aaKnown RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 TGM2P21980 687 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 CCNFP41002 786 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 RANBP1P43487 201 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 CDH6P55285 790 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 FAM43BQ6ZT52 329 aaPredicted RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 CDHR3Q6ZTQ4 885 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 ACAD11Q709F0 780 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 MAP7D3Q8IWC1 876 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 ADPGKQ9BRR6 497 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 OCEL1Q9H607 264 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 RPF1Q9H9Y2 349 aaKnown RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 SLC7A8Q9UHI5 535 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 C2CD4BA6NLJ0 364 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 ADAMTS4O75173 837 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 KRT37O76014 449 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 PGK1P00558 417 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 ITGB3P05106 788 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 SNRPAP09012 282 aaKnown RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 C6orf222P0C671 652 aaPredicted RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 GPD1P21695 349 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 POU5F1BQ06416 359 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CDO1Q16878 200 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 DNAL1Q4LDG9 190 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 ADGRG6Q86SQ4 1221 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 ST13P4Q8IZP2 240 aaPredicted RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 STKLD1Q8NE28 680 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 MCUQ8NE86 351 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 ZDHHC7Q9NXF8 308 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 ATXN10Q9UBB4 475 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 PHF24Q9UPV7 400 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CENPFP49454 3210 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 BCLAF3A2AJT9 711 aaKnown RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 DPYSL4O14531 572 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 HBP1O60381 514 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CSDE1O75534 798 aaKnown RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 GRAP2O75791 330 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 MAP3K6O95382 1288 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 STAU1O95793 577 aaKnown RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 F2P00734 622 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 PIM1P11309 404 aaPredicted RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 P4HA1P13674 534 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CYP3A5P20815 502 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CLCN3P51790 818 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 YWHAZP63104 245 aaKnown RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 DBN1Q16643 649 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 HSF5Q4G112 596 aaPredicted RBP15.17■□□□□ 0.02
PRKN-204ENST00000366896 BOLA3Q53S33 107 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 FAF2Q96CS3 445 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CLPTM1LQ96KA5 538 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 TBCBQ99426 244 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 TTC1Q99614 292 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 XPNPEP3Q9NQH7 507 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 GPATCH2LQ9NWQ4 482 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 PPM1HQ9ULR3 514 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 TTLL3Q9Y4R7 772 aa15.17■□□□□ 0.02
PRKN-204ENST00000366896 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 H7C0C1 242 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 PENKP01210 267 aaPredicted RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 MYL3P08590 195 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 PABPC4LP0CB38 370 aaKnown RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 ATP5OP48047 213 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 INCA1Q0VD86 236 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 FAM187BQ17R55 369 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 JADE1Q6IE81 842 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 EBF3Q9H4W6 596 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 ASB7Q9H672 318 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 PLAC1Q9HBJ0 212 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 SPC25Q9HBM1 224 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 HMX1Q9NP08 348 aaPredicted RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 RAB6BQ9NRW1 208 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 TAGLN3Q9UI15 199 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 PLLPQ9Y342 182 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 SPECC1L-ADORA2AF8WAN1 911 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 COPEO14579 308 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 FKBP6O75344 327 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 USP1O94782 785 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 BAG2O95816 211 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 HSPA1AP0DMV8 641 aaKnown RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 HSPA1BP0DMV9 641 aaKnown RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 SH3BGRP55822 239 aaPredicted RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 MBTD1Q05BQ5 628 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 STILQ15468 1287 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 ATG16L1Q676U5 607 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 KYAT3Q6YP21 454 aaKnown RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 CYS1Q717R9 158 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 RXFP2Q8WXD0 754 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 SRPK1Q96SB4 655 aaKnown RBP15.16■□□□□ 0.02
PRKN-204ENST00000366896 THTPAQ9BU02 230 aa15.16■□□□□ 0.02
PRKN-204ENST00000366896 MECRQ9BV79 373 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms