RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 RSPO4Q2I0M5 234 aaPredicted RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 FKBP15Q5T1M5 1219 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 TMEM215Q68D42 235 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 RNF43Q68DV7 783 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 OR6B2Q6IFH4 312 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 NOP9Q86U38 636 aaKnown RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 C11orf74Q86VG3 221 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 DEFB106AQ8N104 65 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 AOPEPQ8N6M6 819 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 FRMD1Q8N878 549 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 HJURPQ8NCD3 748 aaPredicted RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 IPO4Q8TEX9 1081 aaKnown RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 UCMAQ8WVF2 138 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 SORCS1Q8WY21 1168 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 DDX1Q92499 740 aaKnown RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 AZIN2Q96A70 460 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 TMA16Q96EY4 203 aaKnown RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 MYEOVQ96EZ4 313 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 STK33Q9BYT3 514 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 CIPCQ9C0C6 399 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 SMOC1Q9H4F8 434 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 FAM204AQ9H8W3 233 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 FAM207AQ9NSI2 230 aaPredicted RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 ABCB8Q9NUT2 735 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 ASNSD1Q9NWL6 643 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 LIMA1Q9UHB6 759 aaKnown RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 MBD1Q9UIS9 605 aaPredicted RBP10.76□□□□□ -0.69
YBX3-203ENST00000366286 GGA2Q9UJY4 613 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 PCDHGA5Q9Y5G8 931 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 STON1Q9Y6Q2 735 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 LAMA1P25391 3075 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 SPTBN4Q9H254 2564 aa10.76□□□□□ -0.69
YBX3-203ENST00000366286 SYNJ2BP-COX16A0A087WUM0 186 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 LGALS16A8MUM7 142 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 PRR5-ARHGAP8B1AHC4 643 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 NPC1O15118 1278 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 PABPC1P11940 636 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 ZNF18P17022 549 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 PRKCHP24723 683 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 JAM2P57087 298 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 RPS24P62847 133 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 ARHGAP8P85298 464 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 CREB5Q02930 508 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 ENPP2Q13822 863 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 SF3A2Q15428 464 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 MAP7D1Q3KQU3 841 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 ZC3H12AQ5D1E8 599 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 EFHC1Q5JVL4 640 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 MPP7Q5T2T1 576 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 CAVIN1Q6NZI2 390 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 CHST9Q7L1S5 443 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 SLC26A9Q7LBE3 791 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 MFN1Q8IWA4 741 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 AHI1Q8N157 1196 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.75□□□□□ -0.69
YBX3-203ENST00000366286 TMEM35BQ8NCS4 154 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 ANKRD20A12PQ8NF67 263 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 EPS8L1Q8TE68 723 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 WFIKKN2Q8TEU8 576 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 SLC20A1Q8WUM9 679 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 DDX50Q9BQ39 737 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 HSD3B7Q9H2F3 369 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 PDCL3Q9H2J4 239 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 SYNCQ9H7C4 482 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 NLRC4Q9NPP4 1024 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 ELOVL2Q9NXB9 296 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 DLL3Q9NYJ7 618 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 COX16Q9P0S2 106 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 STIM2Q9P246 746 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 CDV3Q9UKY7 258 aaKnown RBP10.75□□□□□ -0.69
YBX3-203ENST00000366286 PI4KAP42356 2102 aa10.75□□□□□ -0.69
YBX3-203ENST00000366286 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.74□□□□□ -0.69
YBX3-203ENST00000366286 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
YBX3-203ENST00000366286 TYW5A2RUC4 315 aaKnown RBP10.74□□□□□ -0.69
YBX3-203ENST00000366286 GDF9O60383 454 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 GFPT2O94808 682 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 MMEP08473 750 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 ZNF806P0C7X5 589 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 TACR2P21452 398 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 CD70P32970 193 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 DHPSP49366 369 aaPredicted RBP10.74□□□□□ -0.69
YBX3-203ENST00000366286 SNX16P57768 344 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 NOMO3P69849 1222 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 CDK17Q00537 523 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 SLC6A3Q01959 620 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 ARID5AQ03989 594 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 EIF4EBP2Q13542 120 aaPredicted RBP10.74□□□□□ -0.69
YBX3-203ENST00000366286 BYSLQ13895 437 aaKnown RBP10.74□□□□□ -0.69
YBX3-203ENST00000366286 STARD3Q14849 445 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 SYCP1Q15431 976 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 FUT11Q495W5 492 aa10.74□□□□□ -0.69
YBX3-203ENST00000366286 ANO6Q4KMQ2 910 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms